Table 1 Homology search against various databases. Homology search against Non-Redundant protein database of NCBI (NR), Human all proteins, pearl oyster all proteins, fruit fly all proteins, lancelet all proteins, sea anemone all proteins and ciona all proteins
From: Loss of the six3/6 controlling pathways might have resulted in pinhole-eye evolution in Nautilus
Databases | Nautilus | Squid | Â | ||||
|---|---|---|---|---|---|---|---|
DB | # Genes in db | Unique queries | Unique subjects | Unique queries | Unique subjects | Common genes | Squid specific genes |
NR | - | 17,893 | 13,772 | 6,700 | 5,606 | 1,611 | 3,995 |
Human | 37,151 | 15,682 | 7,239 | 5,418 | 3,518 | 2,930 | 588 |
Pearl Oyster | 72,597 | 14,597 | 7,954 | 4,761 | 3,474 | 2,623 | 851 |
Fly | 21,899 | 12,628 | 5,493 | 4,301 | 2,807 | 2,484 | 323 |
Lancelet | 50,817 | 16,101 | 8,793 | 5,439 | 3,814 | 2,923 | 891 |
Sea anemone | 27,273 | 14,315 | 6,755 | 4,706 | 3,212 | 2,696 | 516 |
Ciona | 19,858 | 12,515 | 6,224 | 4,325 | 2,905 | 2,309 | 596 |
