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Figure 2

From: Phylogenetic and molecular characterization of chicken anemia virus in southern China from 2011 to 2012

Figure 2

(a and b) Bootscan analysis of the recombinant and major and minor parent sequences.Bootscan was based on the pairwise distance model with a window size of 200, step size of 50 and 1000 bootstrap replicates generated by the RDP4 program. (c) A comparison of the three CAV isolates: GD-J-12, GD-C-12, GD-M-12. The GD-J-12 isolate was used as the query. The AJ297684 sequence was included as an outgroup. The y-axis gives the percentage of identity within a sliding window 80-bp wide centered on the position plotted, with a stepsize between plots of 50 bp.

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