Table 1 Oligonucleotide sequences used in this work
From: Discovery of a Structural-Element Specific G-Quadruplex “Light-Up” Probe
Name | Sequence (5′ → 3′) | Structural Elements | Origin |
|---|---|---|---|
93del | GGGG TGGG AGGA GGGT | parallel, interlocked dimeric | Aptamer, HIV-1 integrase |
J19 | GIGT GGGT GGGT GGGT | parallel, dimeric | Aptamer, HIV-1 integrase |
T95 | GGGT GGGT GGGT GGGT | parallel, dimeric | Aptamer, HIV-1 integrase |
T95-2T | TT GGGT GGGT GGGT GGGT | parallel, monomeric | Aptamer, HIV-1 integrase |
c-kit1 | AGGG AGGG CGCT GGGA GGAG GG | snap-back parallel | c-kit oncogene promoter |
Pu24T | TGAG GGTG GTGA GGGT GGGG AAGG | snap-back parallel | c-myc oncogene promoter |
Oxy | GGGG TTTT GGGG | antiparallel | Oxytrichanova telomere |
HT | TT GGGTTA GGGTTA GGGTTA GGGA | hybrid | Human telomere |
dsDNA | Sigma-D8515 | genomic dsDNA | Calf thymus |
ssDNA | Sigma-D8899 | genomic ssDNA | Calf thymus |
RNA | Sigma-R7250 | single-stranded | Calf liver |
