Table 1 Selected ribosomal protein paralogs and their synonymous and non-synonymous substitution rates
Paralog pairs | AGI gene codes | Protein length (aa)* | Amino acid sequence identity (%) | Nucleotide sequence identity (%) | dS | dN | dN/dS |
|---|---|---|---|---|---|---|---|
API2, RPL36aA | At4g14320, At3g23390 | 105 | 100 | 89 | 1.1338 | 0.0011 | 0.0010 |
RPS18A, RPS18C | At1g22780, At4g09800 | 152 | 100 | 88 | 1.1036 | 0.0056 | 0.0051 |
RPS28A, RPS28B | At3g10090, At5g03850 | 64 | 100 | 88 | 0.9059 | 0.0009 | 0.0010 |
RPL21A, RPL21D | At1g57860, At1g57660 | 164 | 100 | 99 | 0.0339 | 0.0000 | 0.0010 |
RPL38A, RPL38B | At2g43460, At3g59540 | 69 | 100 | 90 | 0.7566 | 0.0008 | 0.0010 |
RPL41A, RPL41B | At2g40205, At3g08520 | 25 | 100 | 95 | 0.3252 | 0.0003 | 0.0010 |
RPS13A, RPS13B | At4g00100, At3g60770 | 151 | 99 | 85 | 1.5649 | 0.0029 | 0.0018 |
RPS21A, RPS21B | At3g53890, At5g27700 | 82 | 94 | 83 | 3.9235 | 0.0297 | 0.0076 |
RPL11A, RPL11C | At2g37190, At5g60670 | 166 | 93 | 81 | 1.0114 | 0.0572 | 0.0566 |
RPL28A, RPL28B | At2g19730, At4g29410 | 143 | 90 | 85 | 0.7896 | 0.0597 | 0.0756 |
