Table 1 Summary of the reads mapped to the reference genomes and genes of P. denitrificans in the absence (Control) and presence of 50 mg/L carboxyl-modified SWNT
Control | Carboxyl-modified SWNT | ||||
|---|---|---|---|---|---|
Number of reads | Percentage | Number of reads | Percentage | ||
Total number of high-quality reads | 23080806 | 100.0% | 21831574 | 100.0% | |
Total basepairs of high-quality reads | 1881207366 | 100.0% | 1666282416 | 100.0% | |
Map to Genome | Total mapped reads | 21414916 | 92.8% | 19136498 | 87.7% |
Unique matches | 18935555 | 82.1% | 14784420 | 67.8% | |
Multi-position matches | 2479361 | 10.7% | 4352078 | 19.9% | |
Total unmapped reads | 1665890 | 7.2% | 2695076 | 12.3% | |
Map to Gene | Total mapped reads | 15015022 | 65.1% | 13585102 | 62.2% |
Unique matches | 12168362 | 52.7% | 9259014 | 42.4% | |
Multi-position matches | 2846660 | 12.4% | 4326088 | 19.8% | |
Total unmapped reads | 8065784 | 34.9% | 8246472 | 37.8% | |
