Table 1 Information of the 10 SNPs identified by GWAS studies of KD

From: Systematic Confirmation Study of GWAS-Identified Genetic Variants for Kawasaki Disease in A Chinese Population

Gene

rs ID

Position

MAF

MAF in controls

MAF in CHB†

Call rate (%)

P for HWE (α’ = 0.005)‡

ZFHX3

rs9937546

16:71561220

C

0.051

0.067

98.59

0.505

NAALADL2

rs1870740

3:176364140

C

0.313

0.293

97.18

0.959

TCP1

rs3818298

6:160126706

C

0.445

0.411

99.78

0.050

CAMK2D

rs4834340

4:114620118

A

0.082

0.111

99.46

0.172

LNX1

rs6554112

4:54113392

G

0.309

0.386

99.57

0.287

FCGR2A

rs1801274

1:159746369

G

0.336

0.333

99.35

0.486

MIA-RAB4B

rs2233152

19:45972856

A

0.082

0.078

99.13

0.426

HLA-DQB-HLA-DOB

rs2857151

6:32871492

A

0.291

0.273

97.50

0.818

CD40

rs4813003

20:44196691

T

0.402

0.322

97.72

0.755

BLK

rs2736340

8:11381382

C

0.259

0.256

98.05

0.065

  1. Abbreviations: MAF, minor allele frequency; CHB, Han Chinese in Beijing, China; HWE, Hardy-Weinberg equilibrium.
  2. †MAF was downloaded from the online database of HapMap for Han Chinese in Beijing, China.
  3. ‡The significant level was corrected with the formula of α’ = α/10 = 0.005 according to the Bonferroni method.
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