Figure 1
Linkage disequilibrium pattern of three anchor SNPs rs4820294, rs13057866, rs62236773 and the related variants.
The LD pattern of three anchor SNPs rs13057866, rs4820294, rs62236673 (in green color) and partner SNP rs2899292 are plotted for 208 study participants in this study (H7N9). The LD patterns of the three anchor SNPs and their high LD variants are plotted for 94 individuals from Chinese Han in Beijing (CHB), 264 individuals from Asian (ASN) and 172 individuals from America (AMR), whose genotypes are retrieved from 1000 Genomes Project. The boxes are colored according to D′ measure on a white and red scale where red indicates complete LD (D' = 1). The numbers inside the boxes are r2 measure. The red box without number indicates the highest r2 of 1.0.
