Table 2 LincRNA primers used in this study

From: Systematic identification and characterization of long intergenic non-coding RNAs in fetal porcine skeletal muscle development

Primers

Primer sequence

 

Amplicon size (bp)

Forward (5′-3′)

Reverse (3′-5′)

CUFF30734

CCCTCTTCATTTCACCAGGA

GCAGGCTGAGGACGAGAATA

192

CUFF.34686

ATATTCCTCCCGGGTTTCAC

CCACAGCCAGAATCATCCTT

218

CUFF.48491

GACTACCATCTTGGGGACCA

TGAAGAACCGGGGTTATCAG

210

CUFF.15945

CTAAGGCCCTCTGCAAACTG

TTTTGCTTCCAACTTTTCCA

239

CUFF.6127

CAATGCTGTGGCAACAAGAC

CAGACGAAAGCCAGAAGTCC

241

CUFF.41031

CCCAAGGTGGTGGTTTAGTG

CCCCGTTACTGTGGTACCTG

224

CUFF.3991

ATCCATCCAGCATCTTCTCG

GACACGTGCCAGGTACTGAG

227

CUFF.16680

ACACGTGTGCCAGTCAACAT

AGCCCATCAGTCCCTCTTCT

157

CUFF.1689

GTGCAGCCACTTCTTTCTCC

TTGCAGGTCCCATTCCATAC

228

CUFF.37686

AGGGCCCTCAGTTGTGATTT

GTGGGTGAAGGATTTCCCTA

174

Pig-TBP

GCGATTTGCTGCTGTAATCA

CCCCACCATGTTCTGAATCT

196

Iso1

GTATTTTCTGTGGCGGTTGG

GATGTCCAGAGGAAGCAAGG

282

Iso3

GGAATTGCCCTAACAGAACG

CTACCCGGCCTAGAGTGTTG

210

Iso4

ACTCCACCATCCAGTTCAGG

TTCGCTGAGGGCTGTTTAGT

216

Myog

ACTCCCTTACGTCCATCGTG

CAGGGCTGTTTTCTGGACAT

195

MHC

CGTCAAGGGTCTTCGTAAGC

ATTGTTCCTCAGCCTCCTCA

158

U6

CGCTTCGGCAGCACATATAC

TTCACGAATTTGCGTGTCAT

87

tRNA-lle

AGTGGCGCAATCGGTTAG

AGGCTCGAACTCACAACCTC

78

NEAT1

TTTGAGATGCAGTTGCTTGG

CTCCCCAGCTTCACTTCTTG

205

HOTAIR

GGGCTGCAGAATTCACTCTC

GACTTCCTTCCTTCCGCTCT

207

HPRT

GCCCCAAAATGGTTAAGGTT

TTGCGCTCATCTTAGGCTTT

208