Table 2 Characteristics of studies included in the pooled meta-analysis.

From: Tumour Necrosis Factor-α Gene Polymorphism Is Associated with Metastasis in Patients with Triple Negative Breast Cancer

Ethnicity

Study

Samples (cases/controls)

Genotyping Method

Cases

Controls

PHWE (controls)

    

GG

GA

AA

GG

GA

AA

 

Caucasian

Chouchane, 1997

40/106

ASPCR

15

24

1

72

33

1

0.183

 

Mestiri, 2001

243/174

PCR-RFLP

167

53

23

117

53

4

0.480

 

Giordani, 2003

125/100

PCR-RFLP

104

19

2

84

15

1

0.721

 

Azmy, 2004

705/498

TaqMan

475

208

22

313

167

18

0.458

 

Kamali-Sarvestani, 2005

223/235

ASO-PCR

192

31

0

203

32

0

0.263

 

Scola, 2006

84/106

PCR-RFLP

71

12

1

79

26

1

0.472

 

Gaudet, 2007

5156/4983

TaqMan

3679

1345

132

3488

1368

127

0.604

 

Gonullu, 2007

38/24

PCRS-SPM

30

6

2

15

9

0

0.258

 

Sirotkovic-Skerlev, 2007

158/76

TaqMan

136

22

0

68

8

0

0.628

 

MARIE-GENICA, 2010

3138/5476

MALDI-TOF MS

2237

822

79

3795

1528

153

0.957

 

Karakus, 2011

204/204

ASO-PCR

167

36

1

159

45

0

0.077

 

Madeleine, 2011

869/900

SNPlex system

603

245

21

613

264

23

0.388

 

Gómez Flores-Ramos, 2013

465/294

PCR-RFLP

302

96

67

254

38

2

0.660

Asian

Park, 2002

95/190

PCR-RFLP

75

20

0

134

54

2

0.174

 

Kohaar, 2009

40/150

PCR-RFLP

21

16

3

211

24

2

0.170

 

Pooja, 2011

200/200

Sequencing

179

19

2

166

34

0

0.189

 

Xu, 2014

1016/806

PCR-RFLP

927

89

0

716

89

1

0.300

 

This study

768/565

TaqMan

668

97

3

484

78

3

0.940

  1. ASPCR: allelic specific polymerase chain reaction; ASO-PCR: allele specific oligonucleotide-polymerase chain reaction; MALDI-TOF MS: matrix-assisted laser desorption/ionization time-of flight mass spectrometry; PCR-RFLP: polymerase chain reaction-restriction fragment length polymorphism; PCRS-SPM:polymerase chain reaction sequence-specific primers method; SNPlex system is a genotyping platform of Applied Biosystem.