Figure 2 | Scientific Reports

Figure 2

From: Vy-PER: eliminating false positive detection of virus integration events in next generation sequencing data

Figure 2

Vy-PER ideogram summary plot.

Negative example without true virus integrations: Patient genome sequenced with 40× coverage and analysed with highest sensitivity, eliminating 6400 false positives and leaving three unsupported singletons (pseudomonas phage, caviid herpes, cercopithecine herpes) which we manually eliminated as alignment artefacts. PhiX and M13 originated from the 1% Illumina sequencing library control spike-in. The plot shows integration sites down to single chimeras.

Back to article page