Table 1 Comparison of plastid genomic characteristics across Bambusoideae. Taxa with plastid genomes sequenced in this study are indicated in bold
From: Evidence for horizontal transfer of mitochondrial DNA to the plastid genome in a bamboo genus
Taxon | Size | LSC | SSC | IR | Protein Genes (unique) | tRNA (unique) | rRNA (unique) | GC% |
|---|---|---|---|---|---|---|---|---|
Olyreae | ||||||||
Olyra latifolia | 136,785 | 80,729 | 12,944 | 21,556 | 82(76) | 39(31) | 8(4) | 38.9 |
Pariana sp. | 140,162 | 82,327 | 12,743 | 22,546 | 83(77) | 39(31) | 8(4) | 38.9 |
P. campestris | 140,120 | 82,278 | 12,750 | 22,546 | 83(77) | 39(31) | 8(4) | 38.9 |
P. radiciflora | 140,126 | 82,285 | 12,749 | 22,546 | 83(77) | 39(31) | 8(4) | 38.9 |
Bambuseae | ||||||||
Neotropical | ||||||||
Chusquea sp. | 138,257 | 81,791 | 12,894 | 21,786 | 84(77) | 40(32) | 8(4) | 38.8 |
C. circinata | 137,951 | 81,431 | 12,912 | 21,804 | 84(77) | 39(31) | 8(4) | 38.8 |
Otatea glauca | 136,377 | 82,841 | 12,870 | 20,333 | 84(77) | 39(31) | 8(4) | 38.8 |
Paleotropical | ||||||||
Bambusa emeiensis | 139,493 | 82,988 | 12,901 | 21,802 | 84(77) | 39(31) | 8(4) | 38.9 |
B. oldhamii | 139,350 | 82,889 | 12,881 | 21,790 | 84(77) | 39(31) | 8(4) | 38.9 |
Dendrocalamus latiflorus | 139,394 | 83,030 | 12,854 | 21,755 | 84(77) | 39(31) | 8(4) | 38.9 |
Arundinarieae | ||||||||
Acidosasa purpurea | 139,697 | 83,273 | 12,834 | 21,795 | 84(77) | 39(31) | 8(4) | 38.9 |
Gelidocalamus tessellatus | 139,712 | 83,220 | 12,808 | 21,842 | 84(77) | 39(31) | 8(4) | 38.9 |
Phyllostachys edulis | 139,679 | 83,213 | 12,870 | 21,798 | 84(77) | 39(31) | 8(4) | 38.9 |
