Table 4 Individual results of identification starting from whole blood samples.
Identification results | Match | Comments | |||||
|---|---|---|---|---|---|---|---|
Tm mapping method | Diff. | Conventional culture method | Sequencing method | Cult. | Seq. | ||
Control: Healthy whole blood | |||||||
None detected | — | No culture growth | — | — | Negative control | ||
Patient | |||||||
1 | Staphylococcus capitis/epidermidis | 0.09 | Staphylococcus epidermidis | ✓ | — | ||
2 | Staphylococcus capitis/epidermidis | 0.12 | Staphylococcus epidermidis | ✓ | — | ||
3 | Staphylococcus capitis/epidermidis | 0.13 | No culture growth | Staphylococcus epidermidis | — | ✓ | |
4 | Streptococcus agalactiae | 0.13 | Streptococcus agalactiae Escherichia coli | Streptococcus agalactiae | ✓ | ✓ | dominant bacteria |
5 | Staphylococcus aureus | 0.14 | Staphylococcus aureus | ✓ | — | ||
6 | Staphylococcus capitis/epidermidis | 0.15 | Staphylococcus epidermidis | ✓ | — | ||
7 | Staphylococcus haemolyticus | 0.15 | Staphylococcus haemolyticus | ✓ | — | ||
8 | Bacteroides vulgatus | 0.15 | Bacteroides vulgatus | ✓ | — | ||
9 | Acinetobacter baumannii | 0.16 | No culture growth | Acinetobacter baumannii | — | ✓ | |
10 | Staphylococcus aureus | 0.16 | Staphylococcus aureus | ✓ | — | ||
11 | Escherichia coli | 0.16 | No culture growth | Escherichia coli | — | ✓ | |
12 | Escherichia coli | 0.16 | Escherichia coli | ✓ | — | ||
13 | Bacillus cereus | 0.17 | No culture growth | Bacillus cereus | — | ✓ | |
14 | Staphylococcus haemolyticus | 0.17 | Staphylococcus haemolyticus | ✓ | — | ||
15 | Escherichia coli | 0.18 | No culture growth | Escherichia coli | — | ✓ | |
16 | Staphylococcus capitis/epidermidis | 0.18 | No culture growth | Staphylococcus epidermidis | — | ✓ | |
17 | Streptococcus pyogenes | 0.18 | Streptococcus sanguinis | Streptococcus pyogenes | × | ✓ | |
18 | Staphylococcus capitis/epidermidis | 0.18 | Staphylococcus epidermidis | ✓ | — | ||
19 | Escherichia coli | 0.18 | Escherichia coli | ✓ | — | ||
20 | Staphylococcus caprae | 0.18 | Staphylococcus epidermidis | Staphylococcus caprae | × | ✓ | |
21 | Enterococcus facium | 0.18 | Enterococcus facium | ✓ | — | ||
22 | Staphylococcus aureus | 0.19 | No culture growth | Staphylococcus aureus | — | ✓ | |
23 | Staphylococcus aureus | 0.19 | Staphylococcus aureus | ✓ | — | ||
24 | Staphylococcus capitis/epidermidis | 0.19 | Staphylococcus epidermidis | ✓ | — | ||
25 | Staphylococcus caprae | 0.20 | Staphylococcus epidermidis | Staphylococcus caprae | × | ✓ | |
26 | Pseudomonas aeruginosa | 0.20 | Pseudomonas aeruginosa | ✓ | — | ||
27 | Bacillus cereus | 0.20 | Bacillus cereus | ✓ | — | ||
28 | Staphylococcus haemolyticus | 0.21 | Staphylococcus aureus | Staphylococcus haemolyticus | × | ✓ | |
29 | Escherichia coli | 0.21 | Escherichia coli Bacteroides thetaiotaomicron Bacteroides vulgatus | Escherichia coli | ✓ | ✓ | dominant bacteria |
30 | Escherichia coli | 0.21 | Escherichia coli | ✓ | — | ||
31 | Staphylococcus haemolyticus | 0.22 | No culture growth | Staphylococcus haemolyticus | — | ✓ | |
32 | Staphylococcus capitis/epidermidis | 0.22 | Staphylococcus epidermidis | ✓ | — | ||
33 | Staphylococcus caprae | 0.22 | Staphylococcus epidermidis | Staphylococcus caprae | × | ✓ | |
34 | Staphylococcus haemolyticus or | 0.22 | Staphylococcus haemolyticus | Staphylococcus haemolyticus | ✓ | ✓ | broad match |
Staphylococcus lugdunensis | 0.26 | ||||||
35 | Staphylococcus caprae | 0.24 | No culture growth | Staphylococcus caprae | — | ✓ | |
36 | Staphylococcus aureus | 0.24 | No culture growth | Staphylococcus aureus | — | ✓ | |
37 | Staphylococcus capitis/epidermidis | 0.24 | Staphylococcus epidermidis | ✓ | — | ||
38 | Escherichia coli | 0.24 | No culture growth | Escherichia coli | — | ✓ | |
39 | Klebsiella pneumoniae | 0.25 | Klebsiella pneumoniae | ✓ | — | ||
40 | Staphylococcus capitis/epidermidis | 0.26 | Staphylococcus epidermidis | ✓ | — | ||
41 | Escherichia coli | 0.26 | Escherichia coli | ✓ | — | ||
42 | Citrobacter freundii | 0.26 | Citrobacter freundii | ✓ | — | ||
43 | Staphylococcus caprae | 0.27 | Staphylococcus epidermidis | Staphylococcus caprae | × | ✓ | |
44 | Acinetobacter calcoaceticus | 0.28 | No culture growth | Acinetobacter calcoaceticus | — | ✓ | |
45 | Escherichia coli | 0.28 | Escherichia coli Enterococcus faecalis | Escherichia coli | ✓ | ✓ | dominant bacteria |
46 | Staphylococcus hominis | 0.28 | Staphylococcus hominis | ✓ | — | ||
47 | Escherichia coli | 0.30 | No culture growth | Escherichia coli | — | ✓ | |
48 | Escherichia coli | 0.30 | Escherichia coli | ✓ | — | ||
49 | Klebsiella pneumoniae | 0.30 | Klebsiella pneumoniae | ✓ | — | ||
50 | Staphylococcus lugdunensis | 0.31 | No culture growth | Staphylococcus lugdunensis | — | ✓ | |
51 | Klebsiella pneumoniae | 0.31 | Klebsiella pneumoniae | ✓ | — | ||
52 | Staphylococcus capitis/epidermidis | 0.32 | Staphylococcus epidermidis | ✓ | — | ||
53 | Staphylococcus warneri | 0.33 | No culture growth | Staphylococcus warneri | — | ✓ | |
54 | Enterobacter cloacae | 0.35 | Enterobacter cloacae | ✓ | — | ||
55 | Streptococcus pyogenes | 0.36 | No culture growth | Streptococcus pyogenes | — | ✓ | |
56 | Escherichia coli | 0.38 | Escherichia coli | ✓ | — | ||
57 | Staphylococcus hominis | 0.39 | No culture growth | Staphylococcus hominis | — | ✓ | |
58 | Staphylococcus cohnii | 0.43 | No culture growth | Staphylococcus cohnii | — | ✓ | |
59 | Aeromonas hydrophila | 0.50 | Aeromonas hydrophila | Aeromonas hydrophila | ✓ | ✓ | |
