Table 1 Salient features of the advance draft of desi chickpea (ICC4958) genome assembly.
From: An advanced draft genome assembly of a desi type chickpea (Cicer arietinum L.)
Total size (base) | 510,879,539 |
Number of scaffolds | 38,513 |
Minimum scaffold length(bp) | 1000 |
Maximum scaffold length(bp) | 54,992,815 |
Average scaffold length(bp) | 13,265 |
N50 length(bp) | 39,901,017 |
N50 index | 6 |
GC content (%) | 27.95 |
Length of pseudomolecules (bp) | |
Ca_LG_1 | 39,901,017 |
Ca_LG_2 | 33,233,457 |
Ca_LG_3 | 42,267,542 |
Ca_LG_4 | 54,992,815 |
Ca_LG_5 | 45,819,701 |
Ca_LG_6 | 54,841,389 |
Ca_LG_7 | 45,279,478 |
Ca_LG_8 | 17,664,089 |
Protein-coding gene annotation | |
Number of genes | 30,257 |
Total gene length | 91,806,333 |
Total CDS length | 35,503,303 |
Number of predicted mRNA | 30,686 |
Average gene length (bp) | 3034 |
Average coding sequence (CDS) length (bp) | 1173 |
Average exon length (bp) | 253 |
Average intron length (bp) | 432 |
Average number of exons per gene | 5.1 |
GC content in CDS | 41.60% |
