Table 2 P. aeruginosa gene transcription under ΔznuA-induced Zn2+ depletion.

From: ZnuA and zinc homeostasis in Pseudomonas aeruginosa

Locus ID

Predicted functionsa

Fold

Zur binding

change

site (E-value)

PA0781

TonB-dependent receptor (ZnuD)

172.2

0.0012

PA1921

methyltransferase

15.1

0.00027

PA1922

TonB-dependent receptor

147.3

0.00027

PA1923

cobaltochelatase subunit (CobN)

122.2

PA1924

ExbD

44.7

PA1925

hypothetical

56.4

PA2434

hypothetical

6.5

0.11

PA2435

P-type ATPase importer (HmtA)

5.6

PA2437

membrane protease subunit of HflC family

14.4

PA2438

HflC membrane protease subunit

10.6

PA2439

membrane protease subunit of HflK family

9.0

PA2911

TonB dependent receptor

8.1

0.00027

PA2912

nucleotide binding domain of ABC transporter

8.8

PA2913

iron periplasmic binding protein

9.1

PA2914

transmembrane domain of Vitamin B12 ABC permease

8.0

PA2915

metallo β-lactamase

5.2

PA2916

lysine transporter (LysE)

4.2

PA3282

hypothetical

4.1

PA3283

hypothetical

5.0

PA3284

hypothetical

5.0

PA3600

50S ribosomal protein L36

89.2

0.0013

PA3601

50S ribosomal protein L31

109.0

 

PA4063

Zn2+ periplasmic binding protein

45.1

0.0011

PA4064

ABC transporter nucleotide binding protein

17.2

PA4065

lipoprotein release ABC transporter permease

22.1

PA4066

lipoprotein

10.6

PA4833

hemolysin III family protein

5.0

PA4834

putative membrane transporter

27.4

0.0014

PA4835

hypothetical

35.2

PA4836

hypothetical

72.9

PA4837

TonB-dependent siderophore receptor

110.0

PA4838

hypothetical membrane protein

6.7

0.0014

PA5498

Zn2+ ABC transporter SBP (ZnuA)

5.2

0.0012

PA5532

cobalamin biosynthesis protein (CobW)

8.9

PA5534

hypothetical

57.5

0.00021

PA5535

cobalamin synthesis protein

46.1

PA5536

Zn2+-independent transcription regulator (DksA2)

134.6

PA5537

glutamine synthetase

6.7

0.00021

PA5538

N-acetylmuramoyl-L-alanine amidase (AmiA)

18.6

0.00017

PA5539

GTP cyclohydrolase (FolE2)

93.6

0.00017

PA5540

carbonate dehydratase

37.6

PA5541

dihydroorotase (PyrC2)

37.9

PA5542

β-lactamase

6.6

PA5543

hypothetical

5.4

  1. aThe functional prediction was determined by BLAST searches (P value < 10−30).