Table 3 Summary of markers used for anchoring of scaffolds.

From: High density linkage mapping of genomic and transcriptomic SNPs for synteny analysis and anchoring the genome sequence of chickpea

 

Total markers on LGs

No. of matched Scaffolds

Anchored lengths (nt)

v1.0

v1.1

v1.0

v1.1

v1.0

v1.1

CaLG1

119

778

62

322

14791696

34198654

CaLG2

138

599

87

314

17304114

27556814

CaLG3

205

912

105

355

23376002

37128598

CaLG4

168

1050

84

404

22093647

44969074

CaLG5

141

942

65

379

16301343

38712624

CaLG6

108

1040

50

430

11482212

45233197

CaLG7

100

897

47

351

8461617

37542609

CaLG8

84

480

32

119

10574966

14354873

Total

1063

6698

532

2674

124,385,597

279,696,443

  1. v1.0 represents the already available draft sequence32 and v1.1 represents the highly anchored improved sequence.
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