Table 1 Candidate genes involved in hypoxia response showing selection in the eastern Himalayas great tits.

From: Genetic responses to seasonal variation in altitudinal stress: whole-genome resequencing of great tit in eastern Himalayas

Pathways

Kegg map

Gene

Hypoxia response in other organisms

Reference

MARK signaling pathway

Map 04010

NFKB2

Hypoxia-induced cell

25, 47, 48, 49

  

MARK1

Hypoxia-induced cell

25

RPS6KA3

  

PTPN5

RPS6KA5

PI3K-akt signaling pathway

Map 04151

CREB1

Hypoxia-induced cell

49

  

F2R

  

LAMB4

LAMB1

ITGA6

Hypoxia-induced cell

50

ITGA2

Tibetan pig

51

PI3KCG

Tibetan

52

PRKAA1

Andeans

53

THBS4

Hypoxia-induced mouse

54

VWF

Hypoxia-induced cell

55

mTOR signaling pathway

Map 04150

PI3KCG

Tibetan

52

  

PRKAA1

Andeans

1

RPS6KA3

  

Calcium signaling pathway

Map 04020

CHRNA7

  

F2R

ITPR2

Hypoxia-induced cell

56, 57

CAMK2G

  

HIF-1 signaling pathway

Map 04066

EP300

Hypoxia-induced cell

58

  

PI3KCG

Tibetan

52

CAMK2G

  

MARK1

Hypoxia-induced cell

25

VEGF signaling pathway

Map 04370

PI3KCG

Tibetan)

52

Other genes

 

ALOX5

Human

59

  1. Bold showed genes sharing between different pathways.