Table 3 Mapped sequence reads from RNA-seq analysis.
From: Transcriptome analysis of hormone-induced gene expression in Brachypodium distachyon
Treatment | No. of reads | TopHat2 | |
|---|---|---|---|
No. of mapped reads | % of mapped reads | ||
Mock 3 h | 14,564,558 | 12,987,675 | 0.89 |
IAA | 13,305,739 | 12,020,000 | 0.90 |
tZ | 13,370,016 | 11,832,703 | 0.89 |
Phx | 14,504,534 | 13,124,973 | 0.90 |
Phx+GA4 | 13,140,608 | 10,548,366 | 0.80 |
Brz220 | 13,651,634 | 11,005,887 | 0.81 |
Brz220+BL | 14,590,592 | 12,002,938 | 0.82 |
SA | 14,877,403 | 12,247,895 | 0.82 |
Mock 1 h | 27,388,326 | 25,423,449 | 0.93 |
ABA | 26,462,899 | 24,717,631 | 0.93 |
MJ | 29,605,491 | 27,494,719 | 0.93 |
ACC | 28,057,412 | 26,336,415 | 0.94 |
