Table 7 GOE analysis of DEGs obtained under high-stringency conditions.
From: Transcriptome analysis of hormone-induced gene expression in Brachypodium distachyon
GOE in Auxin | Term | P-value | FDR |
|---|---|---|---|
GO:0009733 | Response to auxin stimulus | 1.00E-19 | 1.00E-16 |
GO:0010311 | Lateral root formation | 9.90E-16 | 5.10E-13 |
GO:0010102 | Lateral root morphogenesis | 1.20E-13 | 3.10E-11 |
GO:0010101 | Post-embryonic root morphogenesis | 1.20E-13 | 3.10E-11 |
GO:0009741 | Response to brassinosteroid stimulus | 2.80E-12 | 4.90E-10 |
GOE in CK | Â | Â | Â |
GO:0071368 | Cellular response to cytokinin stimulus | 8.60E-07 | 0.00015 |
GO:0009736 | Cytokinin-mediated signaling pathway | 8.10E-07 | 0.00015 |
GO:0009735 | Response to cytokinin stimulus | 4.40E-07 | 0.00015 |
GO:0048511 | Rhythmic process | 5.90E-05 | 0.0062 |
GO:0007623 | Circadian rhythm | 5.90E-05 | 0.0062 |
GOE in SA | Â | Â | Â |
GO:0050832 | Defense response to fungus | 0.0075 | 0.86 |
GO:0002252 | Immune effector process | 0.007 | 0.86 |
GO:0006952 | Defense response | 0.0066 | 0.86 |
GO:0006950 | Response to stress | 0.006 | 0.86 |
GO:0010200 | Response to chitin | 0.006 | 0.86 |
GOE in ABA | Â | Â | Â |
GO:0009737 | Response to abscisic acid stimulus | 4.00E-16 | 1.00E-12 |
GO:0009414 | Response to water deprivation | 7.50E-13 | 7.90E-10 |
GO:0009415 | Response to water | 9.20E-13 | 7.90E-10 |
GO:0009725 | Response to hormone stimulus | 1.50E-08 | 1.00E-05 |
GO:0042538 | Hyperosmotic salinity response | 2.10E-07 | 0.00011 |
GOE in JA | Â | Â | Â |
GO:0009611 | Response to wounding | 7.70E-31 | 2.50E-27 |
GO:0009695 | Jasmonic acid biosynthetic process | 4.20E-23 | 6.70E-20 |
GO:0031408 | Oxylipin biosynthetic process | 6.20E-23 | 6.70E-20 |
GO:0009694 | Jasmonic acid metabolic process | 3.00E-22 | 2.40E-19 |
GO:0031407 | Oxylipin metabolic process | 4.20E-22 | 2.70E-19 |
