Table 2 Predicted targets of unique miR167 sequences using psRNATarget web server tool.
UmiR167 (1–14) | miRNA ID | Unique miR167 Sequence | UR | Unique Target Sequence (Total 27 UTS) | E value | Target Accessibility (UPE) | Target Accession | Target Description | Inhibition |
|---|---|---|---|---|---|---|---|---|---|
1 | ath-miR167a,b, aly-miR167a,b cme-miR167a,b,e, osamiR167a–c mtr-miR167a,b, zma-miR167a–d sbimiR167a, b,i, gma-miR167a,b,d ptc-miR167a–d, bna-miR167c vvi-miR167b,d,e, sly-miR167 bra-miR167a–d aqc-miR167 rco-miR167a,b tae-miR167a,b bdi-miR167a,b dpr-miR167a,b nta-miR167d,e mdmmiR167b–g tcc-miR167a,b. | UGAAGCUGCCAGCAUGAUCUA | 1a | UGAUCAUUCUGGCAGCUUUG | 3 | 19.68 | AT5G41300.1 | Ath-Receptor-like protein kinase-related family protein | Cleavage |
1b | AGAUCAGGCUGGCAGCUUGU | 3.5 | 18.686 | AT1G30330.1 | Ath-ARF6 | Cleavage | |||
NM_001247734.1 | Sly-ARF6 | ||||||||
AK339568.1 | Lja-ARF | ||||||||
LOC100796447 | Gma-ARF6 | ||||||||
Os06g46410.1 | Osa-ARF | ||||||||
Os02g06910.1 | Osa-ARF6 | ||||||||
HM004531.1/HM004533.1 | Zma-ARF16/18 | ||||||||
POPTR_0001s36900g/POPTR_0002s05590g | Ptc-ARF6/8 | ||||||||
Sb04g004430.1/Sb10g027220.1 | Sbi-ARF6/17 | ||||||||
LOC102620318 | Csi-ARF6 | ||||||||
CICLE_v10014198 mg | Ccl-ARF | ||||||||
LOC103484339 | Cme-ARF6 | ||||||||
1c | UAGAUCAGGCUGGCAGCUUGU | 3.5 | 17.28 | AT5G37020.2 | Ath-ARF8 | Cleavage | |||
MTR_2g018690 | Mtr-ARF | ||||||||
XM_002532937.1 | Rco-ARF | ||||||||
2 | osa-miR167d–j, cme-miR167d,f, mtr-miR167b, zma-miR167e–j, sbi-miR167c–h, sof-miR167a,b, gma-miR167c,j, ptc-miR167e,h, vvi-miR167a, lja-miR167, gso-miR167a, ssp-miR167b, dpr-miR167c, mes-miR167, csi-miR167a,c | UGAAGCUGCCAGCAUGAUCUG | 2a | UAGAUCAUGCUGACAGCCUCA | 2.5 | 13.88 | Os07g29820.1 | Osa- NBS-LRR disease resistance protein, putative, expressed | Translation |
2b | UGUUCAUGCCGGCAGCUUCA | 3 | 22.25 | Os06g03830.1 | Osa-retinol dehydrogenase 14, putative, expressed | Translation | |||
2c | UGAUCAUGCUGCCAGGUUCA | 3.5 | 11.33 | Os09g37520.1 | Osa-DUF630 | Translation | |||
3 | tcc-miR167c csi-miR167b ahymiR167, ptc-miR167f,g gmamiR167e, f , cme-miR167c | UGAAGCUGCCAGCAUGAUCUU | 3 | GAAAACAUGCUGGCAGCUUUG | N/A | TCM_042613 | Tcc-GATA | N/A | |
4 | ath-miR167c, aly-miR167c | UAAGCUGCCAGCAUGAUCUUG | 4a | UUAGAUCAGGCUGGCAGCUUG | 3.5 | 17.1 | AT5G37020.2 | Ath-ARF8 | Cleavage |
4b | UUAGAUCAGGCUGGCAGCUUG | 3.5 | 19.54 | AT5G37020.1 | Ath-ARF8 | Cleavage | |||
4c | AAUGAUCAUUCUGGCAGCUUU | 4 | 19.72 | AT5G41300.1 | Ath-Receptor-like protein kinase-related family protein | Cleavage | |||
4d | UGAGAUCAGGCUGGCAGCUUG | 2.5 | 21.65 | AT1G30330.1 | Ath-ARF6 | ||||
LOC103840407 | Bra-ARF6 | ||||||||
4e | AGGAUCAUGCUUGCCGCUUG | 3.5 | 20.64 | AT2G21550.1 | Ath-Bifunctional dihydrofolate reductase/ thymidylate synthase | Translation | |||
5 | ath-miR167d, aly-miR167d, cca-miR167, nta-miR167a–c, rco-miR167c | UGAAGCUGCCAGCAUGAUCUGG | 5a | UGAUCAUUCUGGCAGCUUUG | 3 | 19.68 | AT5G41300.1 | Ath-Receptor-like protein kinase-related family protein | Cleavage |
5b | CGGAUUAUCCCGGCAGCUUCG | 3.5 | 17.04 | AT5G23060.1 | Ath-Calcium sensing receptor | Translation | |||
5c | UUAGAUCAGGCUGGCAGCUUGU | 3.5 | 17.28 | AT5G37020.2 | Ath-ARF8 | Cleavage | |||
5d | AGAUCAGGCUGGCAGCUUGU | 3.5 | 18.68 | AT1G30330.1 | Ath-ARF6 | Cleavage | |||
LOC100829021/LOC100837546 | Bdi-ARF6/17 | ||||||||
5e | CAGGGCUUGUUGGCAGCUUUA | 3.5 | 19.27 | AT3G01820.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | Cleavage | |||
5f | UUAGAUCAGGCUGGCAGCUUGU | 3.5 | 19.57 | AT5G37020.1 | Ath-ARF8 | Cleavage | |||
6 | gma-miR167g, bdi-miR167c,d, ccl-miR167, a,b ctr-miR167 | UGAAGCUGCCAGCAUGAUCUGA | 6 | UUAGAUCAGGCUGGCAGCUUGU | N/A | LOC100814479 | Gma-ARF8 | N/A | |
LOC100842100 | Bdi-ARF12 | ||||||||
LOC103863707 | Bra-ARF8 | ||||||||
LOC103501352 | Cme-ARF8 | ||||||||
7 | gma-miR167h | AUCAUGCUGGCAGCUUCAACUGGU | 7 | AGUUGAAGCUGCUGGUGUAAU | 3.5 | 13.31 | 02G145300 | Gma-Methylcrotonoyl-CoA | Cleavage |
8 | gma-miR167i | UCAUGCUGGCAGCUUCAACUGGU | 8 | UUAGUUGAAGCGGUUAGCGUGA | N/A | LOC100779102 | Gma-leucinerich repeat receptor-like protein kinase | N/A | |
9 | ppt-miR167 | GGAAGCUGCCAGCAUGAUCCU | 9 | GGCAUCAUGCUGUCAGCUUUC | 2.5 | N/A | PHYPADRAFT_211955 | Ppt-Predicted protein | Cleavage |
10 | bna-miR167a,b | UGAAGCUGCCAGCAUGAUCUAA | 10 | UUAGAUCAGGCUGGCAGCUUGU | N/A | AT1G30330.1/AT5G37020.1 | Ath-ARF6/8 | Cleavage | |
LOC103405902 | Mdm-ARF8 | ||||||||
LOC102631382 | Csi-ARF8 | ||||||||
11 | bna-miR167d | UGAAGCUGCCAGCAUGAUCU | 11 | AGAUCAGGCUGGCAGCUUGU | N/A | AT1G30330.1/AT5G37020.2 | Ath-ARF6/8 | Cleavage | |
12 | vvi-miR167c | UGAAGCUGCCAGCAUGAUCUC | 12 | GAGAUCAGGCUGGCAGCUUGU | 3.5 | 19.24 | LOC100258129 | Vvi-ARF | Cleavage |
LOC100242923/LOC100260866 | Vvi-ARF6/17 | ||||||||
13 | mdm-miR167h–j | UGAAGCUGCCAGCAUGAUCUUA | 13 | GAGAUCAGGCUGGCAGCUUGU | N/A | NM_001294030.1 | Mdm-ARF2 | N/A | |
LOC100301945 | Sly-ARF8 | ||||||||
14 | mdm-miR167a | AGAUCAUCUGGCAGUUUCACC | 14 | GUGAAAUUGCCGGAUGAUAU | N/A | LOC103428675 | Mdm Calcineurin B-like protein 10 | N/A |
