Table 3 The statistics of the B-box domain lost in group A and group C COL genes of angiosperm species.

From: Comprehensive analysis of the flowering genes in Chinese cabbage and examination of evolutionary pattern of CO-like genes in plant kingdom

 

Group A

Group B

Group C

Total

Percentage*

Percentage*

Species

Two B-box

One B-box

One B-box

Two B-box

One B-box

Gene Number

Group A-lost

Group C-lost

Aco

2

0

1

5

0

8

0.00

0.00

Aly

6

0

4

5

3

18

0.00

16.67

Ath

6

0

4

7

0

17

0.00

0.00

Bdi

5

2

3

2

3

15

13.33

20.00

Bra

7

1

6

8

3

25

4.00

12.00

Ccl

3

1

2

8

0

14

7.14

0.00

Cpa

3

0

2

5

0

10

0.00

0.00

Cru

6

0

4

5

1

16

0.00

6.25

Csa

4

1

3

5

0

13

7.69

0.00

Csi

3

1

2

12

0

18

5.56

0.00

Egr

3

0

2

5

0

10

0.00

0.00

Fve

3

0

2

2

1

8

0.00

12.50

Gma

8

0

6

12

0

26

0.00

0.00

Gra

6

2

3

12

0

23

8.70

0.00

Lus

2

2

2

8

1

15

13.33

6.67

Mdo

6

0

5

6

0

17

0.00

0.00

Mes

7

0

3

7

1

18

0.00

5.56

Mgu

3

1

3

4

1

12

8.33

8.33

Mtr

4

0

1

4

1

10

0.00

10.00

Osa

4

3

3

2

5

17

17.65

29.41

Ppe

3

0

2

5

0

10

0.00

0.00

Ptr

6

0

3

7

3

19

0.00

15.79

Pvi

6

3

2

1

6

18

16.67

33.33

Pvu

4

0

4

6

0

14

0.00

0.00

Rco

3

0

2

4

1

10

0.00

10.00

Sbi

5

1

3

3

4

16

6.25

25.00

Sit

4

1

5

4

1

15

6.67

6.67

Sly

5

0

3

5

0

13

0.00

0.00

Stu

5

0

2

9

0

16

0.00

0.00

Tca

4

0

2

6

0

12

0.00

0.00

Tha

4

0

4

7

1

16

0.00

6.25

Vvi

2

0

1

3

0

6

0.00

0.00

Zma

5

2

5

4

1

17

11.76

5.88

  1. Note: The abbreviations represent the species as follows: Aco, Aquilegia coerulea; Aly, Arabidopsis lyrata; Ath, Arabidopsis thaliana; Bdi, Brachypodium distachyon; Bra, Brassica rapa; Ccl, Citrus clementina; Cpa, Carica papaya; Cru, Capsella rubella; Csa, Cucumis sativus; Csi, Citrus sinensis; Egr, Eucalyptus grandis; Fve, Fragaria vesca; Gma, Glycine max; Gra, Gossypium raimondii; Lus, Linum usitatissimum; Mdo, Malus domestica; Mes, Manihot esculenta; Mgu, Mimulus guttatus; Mtr, Medicago truncatula; Osa, Oryza sativa; Ppe, Prunus persica; Ptr, Populus trichocarpa; Pvi, Panicum virgatum; Pvu, Phaseolus vulgaris; Rco, Ricinus communis; Sbi, Sorghum bicolor; Sit, Setaria italica; Sly, Solanum lycopersicum; Stu, Solanum tuberosum; Tca, Theobroma cacao; Tha, Thellungiella halophila; Vvi, Vitis vinifera; Zma, Zea mays.
  2. *The percentage of B-box loss in Group A or Group C = Number of genes that contained only one B-box domain in Group A or Group C/All the COL genes in the species.