Table 1 Binding Parameters.

From: Discovery of Novel Anti-prion Compounds Using In Silico and In Vitro Approaches

Compound

Ka, M−1 sec−1

Kd, M−1 sec−1

KD, μM

AutoDockBinding Energy, kcal/mol

BMD42-01

   

−4.4

BMD42-02

6.18E + 01

1.63E-03

26.4

−5.71

BMD42-03

2.25E + 01

4.26E-03

189

−5.32

BMD42-04

2.76E + 03

5.99E-01

217

−5.32

BMD42-05

   

−6.2

BMD42-06

2.44E + 06

2.46E + 03

1010

−6.65

BMD42-07

1.22E + 03

6.83E-01

559

−6.21

BMD42-08

   

−5.64

BMD42-09

   

−5.86

BMD42-10

1.19E + 03

5.25E-01

442

−6.08

BMD42-11

   

−5.82

BMD42-12

2.15E + 02

2.15E-01

999

−6.52

BMD42-13

   

−4.76

BMD42-14

9.91E + 02

4.39E-01

443

−6.88

BMD42-15

   

−6.56

BMD42-16

5.98E + 01

3.37E-03

56.3

−6.35

BMD42-17

3.64E + 01

5.67E-03

155

−6.91

BMD42-18

   

−6.34

BMD42-19

5.53E + 04

1.08E + 01

195

−6.53

BMD42-20

   

−5.9

BMD42-21

   

−5.04

BMD42-22

1.81E + 02

8.15E-02

451

−6.98

BMD42-23

2.36E + 01

2.68E-03

114

−7.63

BMD42-24

2.19E + 03

5.22E-01

239

−5.86

BMD42-25

2.02E + 05

3.31E + 02

1640

−5.67

BMD42-26

2.62E + 04

1.59E + 01

606

−5.5

BMD42-27

   

−6.51

BMD42-28

   

−5.97

BMD42-29

4.07E + 04

8.76E-01

21.5

−7.87

BMD42-30

1.31E + 04

2.49E + 00

191

−5.09

BMD42-31

1.03E + 05

1.22E + 01

331

−5.75

BMD42-32

   

−6.73

BMD42-33

1.30E + 01

8.03E-03

465

−5.8

BMD42-34

1.22E + 03

6.83E-01

559

−6.88

BMD42-35

   

−5.7

BMD42-36

2.14E + 03

8.43E-01

394

−6.75

BMD42-37

   

−6.9

Quinacrine

6.51E + 01

4.26E-03

30.4

−6.48

  1. Ka, Kd and KD denote association rate, dissociation rate and dissociation constant rate, respectively. Blanks indicate unbinding.