Table 1 Information for 40 EV-D68 strains with complete or near-complete genomes publicly available, 20 of which are from this study.
Strain Name | GenBank Accession | Collection Date | Country | Sequence Length | Genome Completeness | Defined Group |
|---|---|---|---|---|---|---|
NY120 | KP745751 | 09/28/2014 | USA | 7332 | complete | O |
NY124 | KP745752 | 09/29/2014 | USA | 7288 | near | O |
NY126 | KP745753 | 09/28/2014 | USA | 7283 | near | O |
NY130 | KP745754 | 09/30/2014 | USA | 7308 | near | O |
NY153 | KP745755 | 10/02/2014 | USA | 7332 | complete | O |
NY160 | KP745756 | 10/05/2014 | USA | 7307 | near | O |
NY210 | KP745757 | 10/14/2014 | USA | 7332 | complete | O |
NY263 | KP745758 | 09/18/2014 | USA | 7255 | near | O |
NY275 | KP745759 | 09/19/2014 | USA | 7325 | near | O |
NY278 | KP745760 | 09/19/2014 | USA | 7332 | complete | O |
NY305 | KP745761 | 09/22/2014 | USA | 7325 | near | O |
NY309 | KP745762 | 09/23/2014 | USA | 7268 | near | O |
NY314 | KP745763 | 09/24/2014 | USA | 7308 | near | O |
NY316 | KP745764 | 09/24/2014 | USA | 7333 | complete | O |
NY326 | KP745765 | 09/25/2014 | USA | 7296 | near | O |
NY328 | KP745766 | 09/26/2014 | USA | 7333 | complete | O |
NY329 | KP745767 | 09/26/2014 | USA | 7321 | near | O |
NY73 | KP745768 | 09/25/2014 | USA | 7289 | near | O |
NY74 | KP745769 | 09/25/2014 | USA | 7219 | near | O |
NY77 | KP745770 | 09/28/2014 | USA | 7308 | near | O |
Beijing-R0132 | KP240936 | 2014 | China | 7332 | complete | N |
STL_2014_12 | KM881710 | 2014 | USA | 7296 | near | O |
US/CA/14-6103SIB | KP100795 | 10/2014 | USA | 7287 | near | O |
US/MO/14-18947 | KM851225 | 08/2014 | USA | 7331 | complete | O |
US/MO/14-18948 | KM851226 | 08/2014 | USA | 7215 | near | O |
US/MO/14-18949 | KM851227 | 08/2014 | USA | 7311 | near | O |
US/MO/14-18950 | KM851228 | 08/2014 | USA | 7292 | near | O |
US/KY/14-18953 | KM851231 | 08/2014 | USA | 7348 | complete | O |
US/CO/14-93 | KP126911 | 09/2014 | USA | 7265 | near | O |
US/CO/14-94 | KP100793 | 09/2014 | USA | 7265 | near | O |
US/CO/13-60 | KP100794 | 11/2013 | USA | 7315 | near | N |
CA/RESP/10-786 | KM892500 | 2013 | USA | 7341 | complete | N |
CA/AFP/11-1767 | KM892501 | 2013 | USA | 7343 | complete | N |
NZ-2010-541 | JX070222 | 06/23/2010 | NZ * | 7320 | near | N |
JPOC10-290 | AB601882 | 2010 | Japan | 7332 | complete | N |
JPOC10-378 | AB601883 | 2010 | Japan | 7331 | complete | N |
NYC403 | JX101846 | 09/2009 | USA | 7341 | complete | N |
BCH895A | KF726085 | 10/06/2008 | China | 7348 | complete | N |
37-99 | EF107098 | 1999 | France | 7333 | complete | N |
Fermon | AY426531 | 1962 | USA | 7367 | complete | N |
