Table 2 Name, accession number, primer sequence, probe number, amplicon size, efficiency and R2 of 15 candidate HKGs.

From: Selection of suitable reference genes for normalization of quantitative RT-PCR in peripheral blood samples of bottlenose dolphins (Tursiops truncatus)

HKG Name

Accession Number

Primer Sequence (5′-3′)

UPL Probe Number

Amplicon Size (bp)

Threshold

Efficiency (%) ± SD

R2

ACTB

AB603937.1

F-AGGACCTCTATGCCAACACG

157

75

0.020

97.97 ± 0.668

1.000

  

R-CCTTCTGCATCCTGTCAGC

     

B2M

DQ404542.1

F-GGTGGAGCAATCAGACCTGT

93

78

0.035

95.19 ± 0.056

0.998

  

R-GCGTTGGGAGTGAACTCAG

     

GAPDH

DQ404538.1

F-CACCTCAAGATCGTCAGCAA

119

81

0.020

97.73 ± 0.186

0.999

  

R-GCCGAAGTGGTCATGGAT

     

HPRT1

DQ533610.1

F-GTGGCCCTCTGTGTGCTC

120

81

0.012

96.95 ± 1.441

0.996

  

R-ACTATTTCTGTTCAGTGCTTTGATGT

     

LDHA

AB477023.1

F-TCCACCATGATTAAGGGTTTG

123

97

0.020

97.70 ± 1.782

0.999

  

R-CTTTCACAACATCTGAGATTCCA

     

LDHB

AB477024.1

F-TCGGGGGTTAACCAGTGTT

161

78

0.005

99.94 ± 1.757

0.993

  

R-AGGGTGTCTGCACTTTTCTTG

     

PGK1

DQ533611.1

F-CACTGTGGCCTCTGGCATA

108

84

0.015

97.41 ± 0.824

0.999

  

R-GCAACAGCCTCAGCATACTTC

     

RPL4

DQ404536.1

F-CAGCGCTGGTCATGTCTAAA

119

108

0.035

97.24 ± 0.831

1.000

  

R-GCAAAACAGCCTCCTTGGT

     

RPL8

GQ141092.1

F-CCATGAATCCTGTGGAGCAT

131

65

0.020

102.29 ± 2.102

1.000

  

R-GGTAGAGGGTTTGCCGATG

     

RPL18

DQ403041.1

F-GCAAGATCCTCACCTTCGAC

93

104

0.020

98.04 ± 1.608

0.999

  

R-GAAATGCCTGTACACCTCTCG

     

RPS9

EU638307.1

F-CTGACGCTGGATGAGAAAGAC

155

77

0.020

99.43 ± 0.918

1.000

  

R-ACCCCGATACGGACGAGT

     

RPS18

DQ404537

F-GTACGAGGCCAGCACACC

114

90

0.020

98.98 ± 0.493

0.999

  

R-TAACAGACAACGCCCACAAA

     

SDHA

DQ404540.1

F-CGTATCCCGCTCCATGAC

144

73

0.012

101.70 ± 3.729

0.994

  

R-CAGGTACACGTGATCCTTCTCA

     

TFRC

DQ404541.1

F- TTTAAACCCAGCAGGAGCAT

140

69

0.020

95.36 ± 0.172

0.999

  

R- AGTGGCACCAATAGCTCCAA

     

YWHAZ

DQ404539

F-TCTCTTGCAAAAACGGCATT

135

76

0.003

99.92 ± 2.681

0.995

  

R-TGCTGTCTTTGTATGACTCTTCACT

    Â