Table 2 Name, accession number, primer sequence, probe number, amplicon size, efficiency and R2 of 15 candidate HKGs.
HKG Name | Accession Number | Primer Sequence (5′-3′) | UPL Probe Number | Amplicon Size (bp) | Threshold | Efficiency (%) ± SD | R2 |
|---|---|---|---|---|---|---|---|
ACTB | AB603937.1 | F-AGGACCTCTATGCCAACACG | 157 | 75 | 0.020 | 97.97 ± 0.668 | 1.000 |
| Â | Â | R-CCTTCTGCATCCTGTCAGC | Â | Â | Â | Â | Â |
B2M | DQ404542.1 | F-GGTGGAGCAATCAGACCTGT | 93 | 78 | 0.035 | 95.19 ± 0.056 | 0.998 |
| Â | Â | R-GCGTTGGGAGTGAACTCAG | Â | Â | Â | Â | Â |
GAPDH | DQ404538.1 | F-CACCTCAAGATCGTCAGCAA | 119 | 81 | 0.020 | 97.73 ± 0.186 | 0.999 |
| Â | Â | R-GCCGAAGTGGTCATGGAT | Â | Â | Â | Â | Â |
HPRT1 | DQ533610.1 | F-GTGGCCCTCTGTGTGCTC | 120 | 81 | 0.012 | 96.95 ± 1.441 | 0.996 |
| Â | Â | R-ACTATTTCTGTTCAGTGCTTTGATGT | Â | Â | Â | Â | Â |
LDHA | AB477023.1 | F-TCCACCATGATTAAGGGTTTG | 123 | 97 | 0.020 | 97.70 ± 1.782 | 0.999 |
| Â | Â | R-CTTTCACAACATCTGAGATTCCA | Â | Â | Â | Â | Â |
LDHB | AB477024.1 | F-TCGGGGGTTAACCAGTGTT | 161 | 78 | 0.005 | 99.94 ± 1.757 | 0.993 |
| Â | Â | R-AGGGTGTCTGCACTTTTCTTG | Â | Â | Â | Â | Â |
PGK1 | DQ533611.1 | F-CACTGTGGCCTCTGGCATA | 108 | 84 | 0.015 | 97.41 ± 0.824 | 0.999 |
| Â | Â | R-GCAACAGCCTCAGCATACTTC | Â | Â | Â | Â | Â |
RPL4 | DQ404536.1 | F-CAGCGCTGGTCATGTCTAAA | 119 | 108 | 0.035 | 97.24 ± 0.831 | 1.000 |
| Â | Â | R-GCAAAACAGCCTCCTTGGT | Â | Â | Â | Â | Â |
RPL8 | GQ141092.1 | F-CCATGAATCCTGTGGAGCAT | 131 | 65 | 0.020 | 102.29 ± 2.102 | 1.000 |
| Â | Â | R-GGTAGAGGGTTTGCCGATG | Â | Â | Â | Â | Â |
RPL18 | DQ403041.1 | F-GCAAGATCCTCACCTTCGAC | 93 | 104 | 0.020 | 98.04 ± 1.608 | 0.999 |
| Â | Â | R-GAAATGCCTGTACACCTCTCG | Â | Â | Â | Â | Â |
RPS9 | EU638307.1 | F-CTGACGCTGGATGAGAAAGAC | 155 | 77 | 0.020 | 99.43 ± 0.918 | 1.000 |
| Â | Â | R-ACCCCGATACGGACGAGT | Â | Â | Â | Â | Â |
RPS18 | DQ404537 | F-GTACGAGGCCAGCACACC | 114 | 90 | 0.020 | 98.98 ± 0.493 | 0.999 |
| Â | Â | R-TAACAGACAACGCCCACAAA | Â | Â | Â | Â | Â |
SDHA | DQ404540.1 | F-CGTATCCCGCTCCATGAC | 144 | 73 | 0.012 | 101.70 ± 3.729 | 0.994 |
| Â | Â | R-CAGGTACACGTGATCCTTCTCA | Â | Â | Â | Â | Â |
TFRC | DQ404541.1 | F- TTTAAACCCAGCAGGAGCAT | 140 | 69 | 0.020 | 95.36 ± 0.172 | 0.999 |
| Â | Â | R- AGTGGCACCAATAGCTCCAA | Â | Â | Â | Â | Â |
YWHAZ | DQ404539 | F-TCTCTTGCAAAAACGGCATT | 135 | 76 | 0.003 | 99.92 ± 2.681 | 0.995 |
| Â | Â | R-TGCTGTCTTTGTATGACTCTTCACT | Â | Â | Â | Â | Â |