Table 1 Summary of results from this work.

From: Complex folding and misfolding effects of deer-specific amino acid substitutions in the β2-α2 loop of murine prion protein

Protein

Rigid loop?

Fibril formation

Oligomer formation

Thermal denaturation

Urea-induced denaturation

Molecular dynamics

recMoPrP

No

Rapid

Slow

Medium

Stable

Loop region can adopt β-turn or 3–10 helix; Tyr168 can be either solvent exposed or protected

recMoPrP-S169N

Yes

Slow

Rapid

Less stable

Less stable

Reduced overall stability; Loop region can adopt β-turn or 3–10 helix; Tyr168 can be either solvent exposed or protected

recMoPrP-N173T

No

Rapid

Slow

Medium

Stable

Loop region can adopt β-turn or 3–10 helix; Tyr168 only solvent protected

recMoPrP-S169N/N173T

Yes

Slow

Very rapid and large oligomers formed

More stable

Less stable

Loop region only adopts a β-turn; Tyr168 only solvent exposed