Figure 1 | Scientific Reports

Figure 1

From: Metagenomic insights into communities, functions of endophytes and their associates with infection by root-knot nematode, Meloidogyne incognita, in tomato roots

Figure 1

The composition and relative abundance of major bacterial taxa of the root-associated microbiome in healthy and nematode-infected tomato.

(A) Soil rhizobacteria around the healthy tomato root (HRS); (B) Endophytes inhabiting the healthy tomato root (HRC); (C) Soil rhizobacteria around the nematode-infected tomato root (IRS); (D) Endophytes inhabiting the nematode-infected tomato root (IRC); (E) Community composition of the root gall-associated microbiome in the nematode-infected tomato based on 16S rRNA gene-based amplicon (Gall-16S); (F) Community composition of the root gall-associated microbiome in the nematode-infected tomato using the taxa-based extracted reads from sequenced shot-gun metagenome (Gall-Meta).

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