Table 3 Single nucleotide polymorphisms (SNPs) recorded in the coding domains of 4,413 single-copy orthologs (SCOs) among Schistosoma japonicum, S. haematobium and S. mansoni.
From: Exploring molecular variation in Schistosoma japonicum in China
Isolate code | Origin(County, Province) | Total intronic SNPs | Intronic SNPss per 1 kb a | Total exonic SNPs | Exon SNPs per 1 kb a | Non-synonymous SNPs | Synonymous SNPs |
|---|---|---|---|---|---|---|---|
Sj1 | Jiashan, Zhejiang | 747,394 | 14.5 ± 12.0 | 40,677 | 6.5 ± 6.1 | 18,999 | 21,678 |
Sj2 | Guichi, Anhui | 761,202 | 14.6 ± 12.5 | 40,033 | 6.4 ± 6.4 | 18,344 | 21,689 |
Sj3 | Yongxia, Jiangxi | 718,704 | 13.9 ± 12.2 | 37,438 | 6.0 ± 6.1 | 17,035 | 20,403 |
Sj4 | Wuhan, Hubei | 768,044 | 14.9 ± 12.4 | 41,210 | 6.6 ± 6.3 | 19,171 | 22,039 |
Sj5 | Yueyang, Hunan | 762,258 | 14.8 ± 12.4 | 40,521 | 6.5 ± 6.2 | 18,658 | 21,863 |
Sj6 | Tianquan, Sichuan | 697,639 | 13.5 ± 12.1 | 37,273 | 5.9 ± 6.1 | 17,550 | 19,723 |
Sj7 | Dali, Yunnan | 764,339 | 14.9 ± 13.0 | 42,333 | 6.8 ± 6.8 | 19,931 | 22,402 |
