Table 1 Top Candidate SNPs from Enhancer Scanning and EMSA Results.
RSID | hg19 coordinates | Tile Location | LD to rs498872 | Overlapping Regulatory Elements |
---|---|---|---|---|
rs7125115 | chr11:118478330 | B | 0.268 | PHLDB1 promoter |
rs12225399 | chr11:118480285 | B | 0.241 | PHLDB1 promoter |
rs45540840 | chr11:118486110 | E | 0.507 | PHLDB1 promoter/enhancer |
rs11216930 | chr11:118488782 | F | 0.507 | PHLDB1 promoter |
rs10892247 | chr11:118490076 | F | 0.507 | PHLDB1 promoter |
rs2236661 | chr11:118499394 | H | 0.477 | PHLDB1 promoter/enhancer |
rs10892248 | chr11:118501022 | H | 0.477 | PHLDB1 promoter/enhancer |
rs73001406 | chr11:118560857 | N | 0.383 | Enhancer/CTCF binding |
rs10790261 | chr11:118579747 | P | 0.266 | H3K27me3 (repression) |
rs10892258 | chr11:118579865 | P | 0.266 | H3K27me3 (repression) |
rs57494551 | chr11:118661398 | S | 0.208 | DDX6 promoter |