Table 2 Information of differential expressed genes related to chlorophyll metabolic and photosynthesis of grapevine under Cu stress.

From: Comparative transcriptome analysis of grapevine in response to copper stress

Trait

Description

No. of up-regulated

No. of down-regulated

Sun

chlorophylls metabolism

chlorophyll a synthesis

0

13

13

chlorophyll cycle

0

1

1

chlorophyll degradation

1

0

1

phytochromobilin synthesis

0

2

0

photosystem II

psbA

0

2

2

psbB

0

1

1

psbP

0

2

2

psbM

1

0

1

psbW

1

0

1

photosystem I

psaB

0

1

1

cytochrome b6-f complex

petA

0

1

1

petC

0

2

2

photosynthetic electron transport

petE

1

0

1

petF

1

0

1

petH

0

1

1

petJ

0

1

1

F-type ATPase

ATPF0B

0

4

4

ATPF0C

0

1

1

Photosynthesis-antenna proteins

LHCA4

0

1

1

LHCB6

0

1

1

thylakoid part

THF1

0

1

1

CURT1

0

2

2

TPL

0

2

2

Others

PKS1

0

1

1

PIF3

0

1

1

HCF136

0

1

1

  1. psbA, photosystem II P680 reaction center D1 protein; psbB, photosystem II CP47 chlorophyll apoprotein; psbP, photosystem II oxygen-evolving enhancer protein 2; psbM, photosystem II PsbM protein; psbW, photosystem II PsbW protein; psaB, photosystem I P700 chlorophyll a apoprotein A2; petA, apocytochrome f; petC, cytochrome b6-f complex iron-sulfur subunit; petE, plastocyanin; petF, ferredoxin; petH, ferredoxin–NADP+ reductase; petJ, cytochrome c6; ATPF0B, F-type H + -transporting ATPase subunit b; ATPF0C, F-type H + -transporting ATPase subunit C; LHCA4; light-harvesting complex I chlorophyll a/b binding protein 4; LHCB6; light-harvesting complex II chlorophyll a/b binding protein 6; THF1, thylakoid formation 1; CURT1, curvature thylakoid 1; TPL, thylakoid lumenal protein; PKS1, phytochrome kinase substrate 1; PIF3, phytochrome-interacting factor 3; HCF136, photosystem II stability/assembly factor HCF136.
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