Table 2 Newly identified loci associated with WC/WHR variation in East Asian-ancestry populations, by gender.

From: Genome-wide association studies in East Asians identify new loci for waist-hip ratio and waist circumference

Nearby gene

Chr

SNP

Alleles

Among men

Among women

Test for homogeneity

Number

β(SE)

P

Number

β(SE)

P

P

WCadjBMI

EFEMP1

2

rs3791679

A/G

21172

4.04(0.63)

1.76E-10

42605

2.43(0.49)

6.31E-07

4.37E-02

ADAMTSL3

15

rs8030379

A/G

16135

1.41(0.72)

4.89E-02

33848

2.37(0.52)

5.70E-06

2.80E-01

CNPY

12

rs3809128

C/T

11098

2.08(1.07)

5.15E-02

18575

1.59(0.88)

7.30E-02

7.24E-01

GNAS

20

rs2057291

G/A

11626

3.10(1.01)

2.15E-03

26302

1.99(0.60)

8.70E-04

3.44E-01

WHRadjBMI

NID2

14

rs1982963

A/G

17516

2.88(1.04)

5.37E-03

33264

6.26(0.78)

8.88E-16

9.32E-03

HLA-DRB5

6

rs5020946

T/G

14055

3.17(0.97)

1.10E-03

30049

3.57(0.65)

3.54E-08

7.32E-01

WCnoBMI

CEP120

5

rs10051787

T/C

20191

4.60(1.00)

4.15E-06

40033

3.82(0.70)

4.89E-08

5.27E-01

TSC22D2

3

rs1868673

C/A

10742

5.58(1.54)

2.93E-04

24820

4.28(0.91)

2.40E-06

4.67E-01

SLC22A2

6

rs368123

G/A

21164

2.30(0.97)

1.73E-02

40581

3.64(0.70)

1.91E-07

2.61E-01

  1. Alleles: Shown as effect allele/other allele. β: Effect of SNPs per allele in percentile of standard deviation, derived from meta-analysis. P: Derived from meta-analysis adjusted for both study-specific inflation factors (for stage I, II) and the estimated inflation factor for the stage I meta-analysis statistic.