Table 1 Identification of CMRs based on RRBS data from Encode.
Sample | NO. | Length ± SD | NO. CG ± SD | CM ± SD | M ± SD | |
|---|---|---|---|---|---|---|
Normal | H1 ESC | 2903 | 39.6 ± 41.03 | 6 ± 3 | 0.65 ± 0.31 | 0.93 ± 0.29 |
SF | 3533 | 37.47 ± 38.56 | 6 ± 2 | 0.43 ± 0.34 | 0.78 ± 0.34 | |
HMEC | 3316 | 35.56 ± 33.35 | 6 ± 2 | 0.49 ± 0.36 | 0.70 ± 0.33 | |
SMC | 10144 | 38.09 ± 37.96 | 6 ± 2 | 0.19 ± 0.30 | 0.30 ± 0.36 | |
BL 1 | 3141 | 35.74 ± 33.25 | 6 ± 2 | 0.52 ± 0.34 | 0.89 ± 0.27 | |
BL 2 | 2431 | 34.85 ± 30.59 | 6 ± 2 | 0.43 ± 0.32 | 0.71 ± 0.28 | |
Pancreas | 2790 | 33.39 ± 30.19 | 6 ± 2 | 0.34 ± 0.34 | 0.51 ± 0.36 | |
Skeleton | 3646 | 36.36 ± 33.75 | 6 ± 2 | 0.39 ± 0.35 | 0.65 ± 0.35 | |
Skin | 4702 | 37.23 ± 37.42 | 6 ± 3 | 0.37 ± 0.35 | 0.52 ± 0.37 | |
Testis | 3908 | 36.99 ± 35.79 | 6 ± 3 | 0.34 ± 0.33 | 0.43 ± 0.36 | |
Uterus | 4351 | 35.88 ± 34.44 | 6 ± 2 | 0.37 ± 0.35 | 0.56 ± 0.37 | |
Normal Mean | 4078 | 36.47 | 6 | 0.41 | 0.63 | |
Cancer | Lung | 5347 | 45.74 ± 52.10 | 7 ± 3 | 0.65 ± 0.33 | 0.76 ± 0.27 |
Colon | 7137 | 49.85 ± 59.29 | 7 ± 4 | 0.64 ± 0.35 | 0.75 ± 0.36 | |
Endometrium | 5019 | 43.64 ± 49.29 | 7 ± 3 | 0.57 ± 0.33 | 0.77 ± 0.26 | |
Neuroblastoma | 5598 | 45.31 ± 54.19 | 7 ± 4 | 0.51 ± 0.35 | 0.69 ± 0.32 | |
AML | 6637 | 50.35 ± 58.80 | 7 ± 4 | 0.62 ± 0.34 | 0.77 ± 0.30 | |
Cervial | 7544 | 58.87 ± 71.41 | 8 ± 5 | 0.69 ± 0.29 | 0.83 ± 0.24 | |
Liver | 6345 | 50.27 ± 61.54 | 7 ± 4 | 0.52 ± 0.33 | 0.73 ± 0.27 | |
PML | 5674 | 38.12 ± 39.70 | 6 ± 3 | 0.41 ± 0.37 | 0.61 ± 0.35 | |
ACL | 4886 | 39.79 ± 41.56 | 7 ± 3 | 0.51 ± 0.35 | 0.71 ± 0.31 | |
CLL | 5156 | 51.66 ± 62.36 | 7 ± 4 | 0.46 ± 0.31 | 0.70 ± 0.26 | |
Prostate | 6541 | 48.21 ± 57.90 | 7 ± 4 | 0.48 ± 0.33 | 0.70 ± 0.29 | |
Breast | 11183 | 64.08 ± 68.72 | 8 ± 5 | 0.63 ± 0.31 | 0.79 ± 0.28 | |
Cancer Mean | 6422 | 48.82 | 7 | 0.56 | 0.73 |