Table 1 Phosphopeptides changed significantly in maize after SA treatment, as identified by LC-MS/MS.

From: Quantitative analysis of changes in the phosphoproteome of maize induced by the plant hormone salicylic acid

Sequencea

Protein Group Accessionsb

Gene ID

Description

phosphoRS Site Probabilitiesc

IonScore

114-117

115-117

116-117

Ratiod

p-value

Ratio

p-value

Ratio

p-value

Response to stimulus

SAPTTPIKDGAASTFAAALSEEER

B7ZZR2

100279748

Phosphoenolpyruvate carboxykinase homolog2

S(1): 100.0; T(5): 97.2

52.86

0.48

1.75E-01

    

SAPSTPKRSAPTTPIK

C0P3W9

541622

Phosphoenolpyruvate carboxykinase

T(4): 98.1; T(5): 100.0

22.6

1.21

6.50E-01

1.62

1.12E-01

1.68

1.28E-01

SAPSTPKRSAPTTPIK

C0P3W9

541622

Phosphoenolpyruvate carboxykinase

S(9): 99.5

22.6

1.21

6.50E-01

1.62

1.12E-01

1.68

1.28E-01

SAPSTPKRSAPTTPIK

C0P3W9

541622

Phosphoenolpyruvate carboxykinase

S(12): 95.3

22.6

1.21

6.50E-01

1.62

1.12E-01

1.68

1.28E-01

SAPSTPKRSAPTTPIK

C0P3W9

541622

Phosphoenolpyruvate carboxykinase

S(1): 99.5; T(5): 99.5; S(13): 100.0

22.6

1.21

6.50E-01

1.62

1.12E-01

1.68

1.28E-01

SAPSTPKRSAPTTPIK

C0P3W9

541622

Phosphoenolpyruvate carboxykinase

S(9): 100.0

22.6

1.21

6.50E-01

1.62

1.12E-01

1.68

1.28E-01

SAPSTPKRSAPTTPIK

C0P3W9

541622

Phosphoenolpyruvate carboxykinase

S(1): 99.7; S(4): 94.9; T(5): 94.9

22.6

1.21

6.50E-01

1.62

1.12E-01

1.68

1.28E-01

EAPTSSFYGGESPTPAPSLQGR

B7ZYS1

100285938

Tpa: phototropic-responsive nph3 family protein

S(12): 100.0

72.53

1.07

7.05E-01

0.61

3.02E-03

0.81

3.01E-03

DDGWGSSDDDTDAIDQDADPEADTTR

B6SQN8

100280985

Protein phosphatase inhibitor 2 containing protein

S(6): 100.0; S(7): 99.8

49.94

2.08

1.39E-01

  

1.7

5.90E-02

ARSEGEQEPVEPAPPVMASPLVAPGTPSGGASLK

B6SS20

100281086

Phototropin-1

S(3): 100.0; S(19): 100.0; T(26): 100.0

34.34

0.63

4.98E-01

0.57

4.32E-01

0.58

4.40E-01

ARSEGEQEPVEPAPPVMASPLVAPGTPSGGASLK

B6SS20

100281086

Phototropin-1

S(3): 100.0; T(26): 97.2

34.34

0.63

4.98E-01

0.57

4.32E-01

0.58

4.40E-01

LTSGQQISGEIPDASPDR

Q9LLI8

542564

Cellulose synthase-2

S(16): 98.5

28.71

0.66

4.62E-02

1.04

8.62E-01

1.24

1.08E-01

LTSGQQISGEIPDASPDR

Q9LLI8

542564

Cellulose synthase-2

S(8): 100.0; S(15): 100.0

28.71

0.66

4.62E-02

1.04

8.62E-01

1.24

1.08E-01

SGSGNIAELPDQGSLR

B4FY17

103626494

Phospholipase c

S(14): 100.0

58.79

0.66

3.91E-02

0.77

3.31E-01

0.78

2.42E-01

VGFPGASR

K7V096

103635738

E3 ubiquitin-protein ligase keg-like

S(7): 100.0

34.52

1.02

8.49E-01

1.53

4.52E-04

1.31

3.76E-03

SPGEVSGPESGQCEPEADADDNVR

C0HE46

100304252

Tho complex subunit 1-like

S(1): 100.0

32.36

1.16

6.42E-01

1.56

3.10E-01

0.82

5.94E-01

NNLTEGGAESDEEIR

F1DJV0

100192956

BZIP transcription factor

S(10): 100.0

60.21

1.13

1.08E-01

1.58

2.91E-04

1.36

2.21E-03

NEAGGIIGTRFESSDVK

K3ZVS1

101783042

Chlorophyll a b-binding protein

T(9): 100.0

28.83

2.09

1.34E-04

4.39

4.86E-06

1.8

9.48E-05

EAAEELSDGEK

K7TZ83

100501516

Sucrose-phosphate synthase family protein

S(3): 100.0

20.98

1.25

1.67E-01

1.43

4.63E-05

1.61

1.94E-04

EAAEELSDGEK

K7TZ83

100501516

Sucrose-phosphate synthase family protein

S(7): 100.0

20.98

1.25

1.67E-01

1.43

4.63E-05

1.61

1.94E-04

AQIATVR

K7UYG3

100383193

Uncharacterized protein

T(5): 100.0

38.37

 

3.80E-01

0.37

9.69E-02

0.79

4.79E-01

EGMESDDEIR

B6UEP1

100286123

Transcription factor HY5

S(5): 100.0

39.09

1.12

3.71E-01

0.65

1.99E-02

1.02

8.16E-01

EGMESDDEIR

B6UEP1

100286123

Transcription factor HY5

S(5): 100.0

39.09

1.12

3.71E-01

0.65

1.99E-02

1.02

8.16E-01

VSAGPGPENSGDDDPTVVEDSVAPQK

B4FLR0

100217168

GrpE protein homolog

S(10): 100.0

66

0.65

9.70E-02

0.79

2.78E-01

0.77

2.23E-01

APEPAEESDEEMGFSLFDD

B4FWI0

100273601

60s acidic ribosomal protein

S(8): 100.0

72.13

1.04

7.52E-01

0.52

8.79E-04

0.62

1.04E-03

AGSGGPDTPVFGDR

B6UBN4

100278637

J domain-containing protein required for chloroplast accumulation response 1-like isoform

S(3): 100.0

65.93

0.99

8.90E-01

1.33

2.51E-02

1.61

4.14E-02

AGSGGPDTPVFGDR

B6UBN4

100278637

J domain-containing protein required for chloroplast accumulation response 1-like isoform

S(3): 100.0

65.93

0.99

8.90E-01

1.33

2.51E-02

1.61

4.14E-02

IATADSQATSDDDEEQKQIEETTER

B6UCY8

100286002

Pre-mRNA-splicing factor prp45

S(10): 99.9

53.31

1.01

8.54E-01

1.26

2.44E-02

1.67

2.19E-02

GLDIETIQQSYTV

C4J9I5

100502231

Plasma membrane atpase 1-like

T(12): 100.0

58.9

1.25

4.80E-03

1.45

1.69E-02

1.61

2.77E-04

LELSAVPSSYYSGQLDPDR

C4JBW0

100502475

Glucose-6-phosphate 1-epimerase

S(12): 99.9

59.58

0.98

8.92E-01

0.52

1.33E-02

0.47

6.79E-03

SSLSESEKNDTPR

C5XUE0

8081975

Protein kiaa0664 homolog

S(4): 100.0

30.3

1.05

7.59E-01

0.69

8.80E-03

0.74

1.48E-02

SSLSESEKNDTPR

C5XUE0

8081975

Protein kiaa0664 homolog

S(4): 96.0; S(6): 96.0

30.3

1.05

7.59E-01

0.69

8.80E-03

0.74

1.48E-02

SLQSTAENNGIDLVK

K7TUQ9

103652775

Phosphatidate phosphatase lpin2-like

S(1): 99.9

30.3

0.82

4.10E-01

0.88

1.81E-01

0.27

1.10E-04

QPSEEPEEQVDLEGDDDGMDDDDAGYR

K7UBY5

100191663

Heterogeneous nuclear ribonucleoprotein r-like isoform

S(7): 99.9

61.42

1.52

2.91E-01

  

1.39

1.56E-02

QPSEEPEEQVDLEGDDDGMDDDDAGYR

K7UBY5

100191663

Heterogeneous nuclear ribonucleoprotein r-like isoform

S(3): 100.0

61.42

1.52

2.91E-01

  

1.39

1.56E-02

QPSEEPEEQVDLEGDDDGMDDDDAGYR

K7UBY5

100191663

Heterogeneous nuclear ribonucleoprotein r-like isoform

S(3): 100.0; S(7): 100.0

61.42

1.52

2.91E-01

  

1.39

1.56E-02

QPSEEPEEQVDLEGDDDGMDDDDAGYR

K7UBY5

100191663

Heterogeneous nuclear ribonucleoprotein r-like isoform

S(3): 100.0

61.42

1.52

2.91E-01

  

1.39

1.56E-02

VRPSTPVDMSPLPSPTK

K7USN0

100281191

2og-fe oxygenase family protein

S(10): 100.0; S(14): 99.9

26.13

0.76

1.18E-01

0.87

2.59E-01

0.55

1.28E-02

STSTPFMNTTDVGK

K7UTP6

542278

Nitrate reductase

S(6): 100.0

43.24

1.67

2.34E-01

1.59

3.79E-01

1.09

6.91E-01

STSTPFMNTTDVGK

K7UTP6

542278

Nitrate reductase

S(3): 94.5

43.24

1.67

2.34E-01

1.59

3.79E-01

1.09

6.91E-01

ALLLQSPSQVVAR

K7V0F9

103635158

Respiratory burst oxidase protein b

S(8): 100.0

45.89

0.57

2.95E-03

0.58

2.79E-01

0.87

3.39E-01

DSLDLSALGAAIPNSAELSAEDK

Q8L8G5

542588

Nucleosome/chromatin assembly factor group A

S(15): 100.0

70.35

1.55

2.07E-01

1.18

8.97E-02

1.35

1.41E-02

IEDSDDEEDLVPDAK

C5×6G2

8084990

Probable amp deaminase-like

S(4): 100.0

55.53

1.29

1.73E-01

1.32

4.69E-02

1.81

2.19E-03

IWQYGDVESDEDEQAPAAR

K3YPM5

101763417

Staphylococcal nuclease domain-containing protein 1-like isoform

S(9): 100.0

65.32

3.28

7.30E-03

2.11

5.94E-02

6.18

7.50E-07

EGGVESDEEIR

K7VQH0

103634871

Bzip transcription factor superfamily protein

S(6): 100.0

41.58

1.33

1.34E-01

1.48

1.05E-01

1.64

1.05E-04

VGSAADWSNQF

A2TJU6

101781720

Aluminum-induced protein-like protein

S(3): 100.0

51.98

1.56

1.50E-03

1.04

8.60E-01

1.32

1.54E-01

GKEEAGSADELDDEE

B4FAR1

100191940

Atpase 2

S(7): 100.0

44.45

0.99

9.73E-01

1.65

6.48E-03

1.61

4.62E-03

RSYTPDDINDR

B4FQ73

100856927

Sr repressor protein

S(2): 100.0; T(4): 100.0

51.97

1.03

6.66E-01

0.98

7.02E-01

0.67

3.43E-02

GLAASQEDLDR

Q5QJA2

100383635

Harpin binding protein 1

S(5): 100.0

23.51

1.14

3.05E-02

1.85

2.25E-04

1.5

7.43E-04

GLDIDTIQQNYTV

Q8L6A2

542052

Proton-exporting ATPase

S(5): 100.0

75.61

1.07

5.77E-01

  

1.52

7.72E-02

GLDIDTIQQNYTV

Q8L6A2

542052

Proton-exporting ATPase

T(12): 100.0

75.61

1.07

5.77E-01

  

1.52

7.72E-02

SGSSSSSSSEDDGMGGR

Q41299

542373

Dehydrin

S(3): 97.6; S(6): 99.9

108.71

2.21

2.91E-01

3.12

5.07E-02

2.44

2.29E-03

SGSSSSSSSEDDGMGGR

Q41299

542373

Dehydrin

S(3): 98.7

108.71

2.21

2.91E-01

3.12

5.07E-02

2.44

2.29E-03

ISSGEGPVSQGLSESGR

K7UHL6

103630022

Phosphate transporter pho1-3-like

S(15): 96.7

31.11

0.99

9.55E-01

0.64

8.46E-02

0.95

6.72E-01

GELALVPQSPDK

P29036

542553

Ferritin-1, chloroplastic

S(9): 100.0

46.1

0.73

3.07E-01

0.71

2.17E-01

0.47

5.49E-02

YEGAESEDDSVR

K7U9Y7

542602

Small heat shock protein 22

S(6): 100.0

52.19

2.12

1.07E-02

3.47

1.01E-04

16.57

1.46E-06

DIEASGPEAGEFSAK

B6T7B8

541890

Aquaporin PIP2.2

S(13): 100.0

60.71

0.97

7.24E-01

1.4

1.56E-02

1.55

1.34E-02

GQSALGSALGLISR

B6U6U2

100285573

Hexose transporter

S(3): 100.0; S(7): 100.0; S(13): 100.0

80.09

1.34

2.84E-01

2.3

2.08E-03

1.12

7.47E-01

GQSALGSALGLISR

B6U6U2

100285573

Hexose transporter

S(7): 100.0

80.09

1.34

2.84E-01

2.3

2.08E-03

1.12

7.47E-01

GQSALGSALGLISR

B6U6U2

100285573

Hexose transporter

S(7): 97.7; S(20): 100.0; S(24): 100.0

80.09

1.34

2.84E-01

2.3

2.08E-03

1.12

7.47E-01

GQSALGSALGLISR

B6U6U2

100285573

Hexose transporter

S(3): 100.0; S(13): 100.0

80.09

1.34

2.84E-01

2.3

2.08E-03

1.12

7.47E-01

AQEEDQSASANTSDSEPEPHDEL

B8A0J2

100279899

Growth regulator

S(7): 96.3

30.9

1.57

1.27E-01

1.63

1.77E-03

1.65

8.52E-04

QDIEASGPEAGEFSAK

Q9ATM7

541889

Aquaporin PIP2-3

S(14): 100.0

35.35

0.56

2.46E-02

0.99

8.58E-01

0.93

4.08E-01

LGSSASFSR

Q9XF58

542619

Aquaporin PIP2-5

S(6): 100.0

33.57

1.93

3.36E-05

1.62

2.24E-04

1.71

1.12E-03

Metabolic process

SFDELSDDDDVYEDSD

B4FQK5

100272775

Eukaryotic peptide chain release factor subunit 1-1

S(6): 100.0

65.76

 

1.92E-01

0.47

1.16E-01

1.32

5.41E-01

TRSNISLDGDDDPYSGNQTER

C0HHJ0

542102

Set domain protein sdg111

S(6): 98.5

20.12

0.59

4.35E-01

  

0.99

9.83E-01

TNSRGSDIGLAK

C5WW43

8057104

Probable cellulose synthase a catalytic subunit 2

T(1): 97.6; S(6): 100.0

28.36

0.62

1.63E-02

    

LAADNAGDTEASPR

B4FAA8

100192037

Transmembrane protein 115

S(12): 100.0

86.02

0.77

7.80E-02

0.67

1.01E-03

0.69

6.11E-06

VVSTQAPVQLGSLR

B4FBC2

100192102

Tpa: gdp-mannose -epimerase 1

S(12): 100.0

41.32

0.57

1.57E-02

0.88

8.34E-02

0.92

4.34E-01

NLQGHLGHGSE

B4FG90

100193773

Anthocyanidin 5,3-O-glucosyltransferase

S(10): 100.0

25.99

1.38

4.42E-02

1.19

7.24E-02

1.57

3.59E-03

LLESNINEHSSEEDIR

B4FNU7

100272474

BSD domain containing protein

S(10): 100.0; S(11): 100.0

30.99

0.85

3.66E-01

0.68

1.01E-01

0.79

1.42E-01

DTLNDVESGSAR

B4FTT0

100273231

Lipid phosphate phosphatase 3

S(10): 100.0

61.33

1.12

3.78E-01

1.61

1.08E-03

1.68

1.87E-01

DPHAVTSVSPK

B4FUW1

100273353

Hemk methyltransferase family member 2

S(9): 99.8

25.17

0.69

1.33E-02

0.9

4.30E-02

0.9

3.83E-02

VEDLWEVAEPQLSPSEK

B6SHG6

100280507

AKIN gamma

S(13): 100.0

51.38

1.53

3.26E-01

  

2.15

4.33E-02

SESLAK

B6T1H0

103633434

40S ribosomal protein S6

S(4): 100.0; S(6): 100.0

25.02

0.85

5.77E-01

0.71

1.33E-01

0.55

1.45E-02

SESLAK

B6T1H0

103633434

40S ribosomal protein S6

S(3): 100.0

25.02

0.85

5.77E-01

0.71

1.33E-01

0.55

1.45E-02

AATSSCNADSE

B6U0×3

100191999

Cytokinin-O-glucosyltransferase

S(10): 100.0

31.62

0.71

8.35E-03

0.83

1.10E-03

0.7

5.12E-04

IEDIDPANDSDASEEGDGDGDDLSVR

B6U1Z4

100285203

ATP binding protein

S(10): 100.0; S(13): 100.0

46.53

0.7

6.58E-01

0.77

7.23E-01

0.68

6.21E-01

DPWGGPLEISNADSATDDDR

B6U4I3

100285405

Endo-1,4-beta-glucanase Cel1

S(14): 99.9

56.71

0.75

1.37E-01

0.76

2.04E-01

0.6

1.41E-01

AQEVPLYSGSDR

B6U753

100285607

Calcium-dependent protein kinase

S(10): 97.9

24.33

0.98

9.48E-01

1.94

1.19E-01

0.81

4.32E-01

DNTQPCFPCSGSGAQVCR

B6U7L5

100278360

Protein disulfide-isomerase lqy1-like

S(10): 97.4

20.35

1.6

8.96E-02

2.1

5.28E-03

1.83

1.06E-02

DREEGEDLSDGGAAEK

B6U7Y7

100285671

USP39 protein

S(9): 100.0

41.87

0.75

1.57E-02

0.65

1.03E-02

1.15

1.24E-01

AEDEEHSSDFEPEENGEGADDEEIDEEDDDGEDSVK

B6U982

100283317

Immediate-early protein RSP40

S(7): 100.0; S(8): 100.0

62.43

2.9

1.54E-02

2.25

5.95E-02

2.66

2.47E-02

VFSQLSGGEGR

C0HEK2

100383535

Probable receptor-like protein kinase at5g24010-like

S(6): 100.0

30.89

1.01

9.01E-01

0.95

7.73E-01

1.65

2.48E-03

NEAGGIIGTRFESSEVK

C0HF02

542478

Photosystem ii subunit29

T(9): 100.0

33.67

1.7

2.69E-02

2.59

3.78E-04

4.01

6.93E-04

NEAGGIIGTRFESSEVK

C0HF02

542478

Photosystem ii subunit29

T(9): 100.0

33.67

1.7

2.69E-02

2.59

3.78E-04

4.01

6.93E-04

GGPDGSSAHQQLAVPENLDATMR

C0HIM6

100381755

Integrin-linked protein kinase family protein

S(6): 100.0; S(7): 100.0

44.83

1.12

4.46E-01

1.58

6.47E-03

1.72

2.72E-03

ASSPQTDAEQGGGSLK

C0P4D8

100286124

Uncharacterized protein

S(3): 100.0

33.2

1.16

1.89E-01

0.95

2.79E-01

0.63

6.19E-04

EVSSDDDFVMPTAQK

C0P8K4

100276864

Dna ligase 1-like

S(3): 100.0; S(4): 100.0

32.66

0.69

9.91E-02

0.54

1.33E-02

0.52

6.10E-03

VPSGDLAALAAAESSER

C0PCC7

100191549

Glutamate decarboxylase

S(3): 100.0

73.3

0.67

1.38E-02

0.53

9.97E-04

0.84

4.66E-02

GLVPLAGSNNESWCQGLDGLASR

C0PD30

100273196

Fructose1,6-bisphosphate aldolase

S(12): 100.0

76.71

2.06

9.29E-02

1.84

2.41E-01

1.58

2.51E-01

SYTNLLDLAEGNFAALGPAAGAGGGGR

C0PDN0

103636651

Tpa: trehalose phosphatase synthase family protein

S(1): 97.7

79.22

0.9

3.11E-01

1.37

3.02E-01

1.57

3.35E-01

STGSTEEFFVR

C0PF64

101027210

Protein phosphatase regulatory subunit-like protein

S(1): 100.0; S(4): 97.4

33.35

0.73

1.04E-02

0.73

7.30E-03

0.56

3.46E-04

MQGLTGTGSPTVNHIER

C4J1N5

100217144

Endothelin-converting enzyme 2-like

S(9): 100.0

40.57

1.16

4.39E-01

1.69

1.13E-02

1.29

1.40E-01

AASSATAPAPADGSVSCGSPR

C4J6F5

100272884

Lymphoid organ expressed yellow head virus receptor protein

S(19): 97.0

28.77

1.33

1.84E-01

1.78

1.84E-01

2.83

1.91E-03

NFDTQESDSEEPSSIGDGDLVK

C4JAH4

100216636

Uncharacterized protein

S(7): 97.2

62.04

0.88

6.83E-01

1.57

5.53E-02

1.15

5.76E-01

QVADSAEGDEPSL

C4JBL2

100285980

Leucine-rich repeat receptor-like protein kinase family protein

S(5): 100.0

85.12

0.98

9.12E-01

0.67

3.85E-03

0.61

1.63E-03

QMSINSVPK

C5WR61

8057236

Serine/threonine-protein phosphatase

S(3): 100.0

29.62

1.04

7.14E-01

1.51

4.26E-02

  

SELVSPASSPR

C5WRC6

8055610

Uncharacterized protein

S(5): 100.0; S(9): 97.9

43.91

1.22

6.10E-03

1.22

9.69E-02

2.23

4.58E-02

LLNADIQIGSPR

C5WZ61

8084177

Cytosolic purine 5-nucleotidase

S(10): 100.0

54.73

2.08

1.25E-02

1.51

1.09E-02

1.75

3.27E-03

GGIDSPSWR

C5×682

8063305

Pantothenate kinase 2-like

S(5): 100.0

27.15

1.12

2.20E-01

1.55

1.11E-02

1.11

4.96E-01

VGGGDGGDGGAAGDSADDGDAK

C5XCA3

8083903

Prp18 domain containing protein

S(15): 100.0

27.71

0.64

9.49E-02

0.87

2.77E-01

0.77

5.49E-02

SNNLSFK

C5XIB3

8059184

Type i inositol- -trisphosphate 5-phosphatase 1-like

S(5): 100.0

27.71

1.55

2.07E-04

1.49

5.25E-02

1.89

2.21E-02

TIGVSGLGEGSPK

C5YTD4

8065266

Tpa: protein kinase superfamily protein isoform 1

S(11): 100.0

36.96

0.87

4.93E-01

1.52

7.15E-02

1.69

2.15E-02

VEEKEESDEDMGFSLFD

C5YYT5

8072508

60s acidic ribosomal protein p2b

S(7): 100.0

27.28

0.92

6.83E-01

1.48

6.27E-02

1.69

7.72E-03

LAVAAPAAVQST

E3UMH7

100101542

Putative growth-regulating factor 1

S(11): 97.4

36.05

0.85

2.66E-01

0.7

1.39E-01

1.39

1.85E-01

GGFADEGSATTESDIEETLK

E9NQE1

542372

Phosphoenolpyruvate carboxylase

S(3): 100.0

83.85

1.11

5.10E-01

0.44

2.20E-04

0.53

2.08E-04

GGFADEGSATTESDIEETLK

E9NQE1

542372

Phosphoenolpyruvate carboxylase

S(13): 97.6

83.85

1.11

5.10E-01

0.44

2.20E-04

0.53

2.08E-04

DLNVVSPR

K3YP69

103626570

Microtubule-associated protein futsch-like isoform

S(6): 100.0

33.14

1.45

8.52E-02

1.54

4.36E-02

1.41

1.70E-01

GRSFGSSSLPR

K3ZPZ9

103632253

Uncharacterized protein

S(7): 93.9; S(8): 99.7

28.33

1.5

4.85E-02

1.34

4.67E-02

1.14

3.70E-01

TVQFVDWCPTGFK

K3ZT92

101753745

Tubulin alpha-3 chain-like

T(10): 100.0

52.8

0.58

8.41E-02

0.7

1.19E-01

0.78

2.13E-01

LSSDVGQLNVNK

K7U6F2

103642014

Putative translation elongation factor Tu family protein

S(3): 98.4

36.82

1.22

5.50E-01

1.77

4.40E-04

1.4

3.79E-02

ASSQASLADPDDFDLTR

K7U832

100281530

Neutral alkaline invertase

S(3): 99.8; S(7): 99.8

35.48

1.14

5.87E-01

1.6

6.16E-03

1.38

5.76E-03

ASSQASLADPDDFDLTR

K7U832

100281530

Neutral alkaline invertase

S(3): 99.9; S(6): 100.0

35.48

1.14

5.87E-01

1.6

6.16E-03

1.38

5.76E-03

NDPNYDSGEEPYELVEAPVSTPLEDYK

K7U9W6

100501384

Programmed cell death protein 4-like

S(7): 100.0

48.25

0.84

7.17E-01

0.55

3.73E-01

0.71

5.41E-01

VMSVASPASPTSPSPPAPPR

K7V0H0

103654185

Putative trehalose phosphatase/synthase family protein

T(11): 96.3; S(12): 96.5

29.02

0.46

1.27E-02

0.87

6.21E-01

0.59

3.17E-02

ESDLEAVGEPMSPAGR

K7V7L2

103651350

O-acyltransferase wsd1-like

S(12): 100.0

34.62

0.61

2.14E-01

1.07

6.81E-01

  

AIAPAVGQSSGMAPVANNNR

K7VE03

103635432

Casein kinase family protein

S(9): 97.5

32.37

0.69

5.62E-01

1.28

5.08E-01

0.61

4.60E-01

RPSYSLSQNQNQAPPAAR

K7W2Z7

100192644

Protein kinase superfamily protein

S(7): 100.0

56.96

0.72

3.64E-02

0.77

1.86E-02

0.66

1.45E-02

SSSPFAASPPSPLR

K7W4F1

103636629

Putative HCNGP-related transcriptional regulator family protein

S(1): 94.1; S(11): 100.0

37.6

1.61

2.26E-01

1.25

3.72E-01

1.39

2.33E-01

SPLQNSPTFNR

K7W787

100273408

Spastin protein orthologue

T(8): 100.0

29.66

1.32

3.40E-01

1.78

4.16E-02

1.39

2.01E-01

SKLSAAAK

O04014

542529

40S ribosomal protein

S(4): 100.0

24.89

0.63

1.69E-02

1.07

8.42E-01

0.93

6.97E-01

GAGGGGGGGDPRSPTK

P31927

542711

Sucrose-phosphate synthase

S(11): 100.0

49.26

1.29

3.61E-01

1.31

2.65E-03

1.51

3.86E-02

GAGGGGGGGDPRSPTK

P31927

542711

Sucrose-phosphate synthase

S(3): 100.0

49.26

1.29

3.61E-01

1.31

2.65E-03

1.51

3.86E-02

GAGGGGGGGDPRSPTK

P31927

542711

Sucrose-phosphate synthase

S(11): 99.9

49.26

1.29

3.61E-01

1.31

2.65E-03

1.51

3.86E-02

GAGGGGGGGDPRSPTK

P31927

542711

Sucrose-phosphate synthase

S(3): 100.0; T(6): 100.0

49.26

1.29

3.61E-01

1.31

2.65E-03

1.51

3.86E-02

GAGGGGGGGDPRSPTK

P31927

542711

Sucrose-phosphate synthase

S(13): 100.0

49.26

1.29

3.61E-01

1.31

2.65E-03

1.51

3.86E-02

LTSGFQQFK

Q41729

542302

Carbonic anhydrase

S(3): 100.0

33.73

1.22

2.33E-01

1.92

1.37E-04

1.82

1.74E-04

VPIEAEMSEDTADDDISSR

K7VN24

100281651

Adhesion regulating molecule conserved region family protein

T(11): 100.0

49.85

1.54

3.06E-01

2.51

2.50E-02

1.84

2.06E-02

VPIEAEMSEDTADDDISSR

K7VN24

100281651

Adhesion regulating molecule conserved region family protein

S(8): 100.0; T(11): 100.0

49.85

1.54

3.06E-01

2.51

2.50E-02

1.84

2.06E-02

VRSPSPPLKK

M1H548

103650711

Arginine/serine-rich splicing factor

S(3): 100.0; S(5): 100.0

20.48

1.39

1.94E-01

1.51

3.56E-01

1.14

7.50E-01

LNQLNSSGGADDDDEDDE

B6THG9

103650892

60S ribosomal protein L5-1

S(6): 98.1

53.57

0.55

1.11E-01

0.58

1.54E-01

0.67

2.08E-01

Regulation of biological process

NENPGLENLNHTPLSDAAAQNLSPR

K7V9×5

100217186

Uncharacterized protein

S(23): 100.0

49.52

0.9

5.48E-01

0.62

2.05E-02

0.67

3.26E-02

EKGDSDEEEDDYDK

C0PA70

100283725

Nuclear cap-binding protein subunit 2

S(5): 100.0

32.44

0.79

1.54E-02

0.64

2.69E-03

0.59

5.45E-04

ALAAGDSNASSSTYDMEDEESDDETTEEGGPVEEASSTGSDK

C0P9K3

100284226

Inner membrane protein albino3

S(11): 97.2

104.62

1.58

1.23E-01

1.21

3.57E-01

1.24

2.45E-01

VDQATPTEHGEEAGVK

C0P3W2

100282270

Kh domain containing protein

T(5): 96.9

20.55

0.86

1.82E-01

0.64

1.36E-03

0.7

8.00E-05

SSVIEGTQPEDDSDKEDVEAK

C5XU69

8064256

Pre-mrna-splicing factor atp-dependent rna helicase dhx16-like

S(13): 100.0

36.52

0.68

3.00E-03

1.1

5.89E-01

1.07

7.89E-01

SHQQGSGHGDDGDQESR

B4FNB7

100272384

Latex-abundant protein

S(6): 99.9

24.56

1.13

1.48E-01

1.72

4.37E-04

1.8

6.12E-05

SGGDVSEDSEDEKPLAAR

C6KE75

100191474

DNA topoisomerase I

S(6): 100.0; S(9): 100.0

54.32

0.97

5.88E-01

0.96

6.91E-01

1.06

2.95E-02

TIKESMDELNSQR

B4FVB8

100281683

Serine threonine-protein kinase

S(5): 100.0

29.1

1.53

1.01E-02

1.34

6.25E-03

1.08

8.13E-02

PDSDNDSGGPSNAGGELSSPR

B6STN2

100281247

Nuclear transcription factor Y subunit B-3

S(3): 99.9

57.63

2.55

2.67E-02

4.4

1.05E-04

0.8

3.78E-01

GGASSSGAAAQSPSSAPNKEPPQLSPADR

B6SXN6

100281671

Homeodomain protein JUBEL1

S(5): 95.5; S(12): 99.9

43.8

0.93

6.15E-01

0.68

5.79E-02

0.78

1.11E-01

VDFDEFGSMDATK

B6TPK0

100284050

CAK1AT

S(8): 100.0

20.65

0.92

7.32E-01

1.53

3.11E-04

1.34

4.89E-03

QIAGGDDSMDEQEDETQENVWGR

C0HIQ2

100381768

Something about silencing protein 10-like isoform x4

S(8): 100.0

24.74

1.14

4.79E-01

0.86

2.97E-01

0.67

4.36E-02

AQLPSPSPSPR

C5XP18

8057759

Tbc1 domain family member 8b-like

S(5): 100.0

27

0.67

1.39E-01

1.02

8.30E-01

0.96

5.32E-02

ATQTVEDSSRPK

K3ZC29

845205

Photosystem ii phosphoprotein

T(4): 100.0

46.85

 

1.14E-01

6.89

5.46E-05

4.61

5.91E-04

ATQTVEDSSRPK

K3ZC29

845205

Photosystem ii phosphoprotein

T(2): 100.0; T(4): 100.0

46.85

 

1.14E-01

6.89

5.46E-05

4.61

5.91E-04

ESEMDEHSGFSDGDGTGK

K7UKZ7

103630545

Transcription elongation factor spt6-like

S(11): 100.0

36.69

0.77

1.53E-01

1.02

8.03E-01

0.55

1.15E-02

DTDSEEELK

K7VGX4

100192601

Calmodulin

S(4): 100.0

42.15

0.71

2.03E-03

0.64

4.86E-05

0.57

2.85E-05

ATQTVEDSSRPKPK

P24993

845205

Photosystem II reaction center protein H

T(2): 100.0; T(4): 100.0

20.17

1.05

6.10E-01

1.5

1.47E-02

1.35

3.58E-03

ATQTVEDSSRPKPK

P24993

845205

Photosystem II reaction center protein H

T(4): 99.9

20.17

1.05

6.10E-01

1.5

1.47E-02

1.35

3.58E-03

DYNSDDEDEAGDDR

B4FYQ9

100280074

Uncharacterized protein

S(4): 98.2

31.79

0.99

9.34E-01

0.83

2.30E-01

0.65

5.19E-02

LQLGSDDEDGEGPYGSDADEGFEAGEGDNEELAIAR

B6SSK6

100191761

Nucleolar RNA helicase 2

S(7): 100.0

104.58

0.57

4.85E-01

    

LQLGSDDEDGEGPYGSDADEGFEAGEGDNEELAIAR

B6SSK6

100191761

Nucleolar RNA helicase 2

S(16): 96.9

104.58

0.57

4.85E-01

    

GRPAFGGPGFSPR

C0PDQ9

100383162

Flowering time control protein fca-like isoform x2

S(12): 100.0

38.56

1.36

1.07E-01

1.07

6.75E-01

1.73

5.62E-03

GRPAFGGPGFSPR

C0PDQ9

100383162

Flowering time control protein fca-like isoform x2

S(11): 100.0

38.56

1.36

1.07E-01

1.07

6.75E-01

1.73

5.62E-03

SGRESDSDADDIEHIEK

C5WPJ1

8054149

Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2-like

S(7): 100.0

32.87

1.21

3.37E-01

1.04

6.62E-01

0.53

1.11E-01

YGVDSFDPNR

C5YHC9

8069634

Tetraspanin-20-like isoform

S(5): 100.0

42.07

1.4

4.22E-01

1.65

4.23E-03

1.25

2.14E-01

VLSHSNESSNGASPEISPR

K3ZPW7

103627850

Tetratricopeptide repeat -containing protein

S(13): 97.8

28.33

0.81

5.87E-01

1.51

4.77E-02

1.13

5.44E-01

DVSNASELATEMQYER

K7TFK8

100384278

Uncharacterized protein

S(3): 100.0; S(6): 100.0

43.57

0.79

2.35E-01

1.13

1.67E-01

1.55

7.36E-03

GEPNISYICSR

K7U143

103641344

Putative glycogen synthase kinase family protein

Y(7): 98.5

40.03

1.14

1.49E-01

0.48

1.83E-03

0.74

1.88E-02

AASRDDGDFDDEEPR

K7U3F5

103641640

Low quality protein: exocyst complex component 2-like

S(3): 100.0

39.12

1.13

5.69E-01

0.86

1.14E-02

0.7

1.05E-03

ELAGAGPSLPSPTSDAR

K7UD94

103628994

Serine threonine protein phosphatase 2a 57 kda regulatory subunit b gamma isoform-like

S(11): 93.1

34.84

1.05

6.91E-01

1.15

3.20E-02

1.82

4.21E-05

VEQPFEEDEMDLDSEDEDEELNVPVVK

K7UM03

542355

Histone deacetylase hdt1

S(14): 100.0

68.93

0.82

3.07E-01

0.81

5.03E-01

0.66

2.05E-01

VEQPFEEDEMDLDSEDEDEELNVPVVK

K7UM03

542355

Histone deacetylase hdt1

S(14): 100.0

68.93

0.82

3.07E-01

0.81

5.03E-01

0.66

2.05E-01

SKDDSSSLASSISGSPR

K7UN30

103629018

Protein chloroplastic-like

S(9): 100.0

24.43

1.65

6.49E-03

1.41

2.54E-02

1.53

8.81E-03

SKDDSSSLASSISGSPR

K7UN30

103629018

Protein chloroplastic-like

S(11): 99.8; S(15): 96.3

24.43

1.65

6.49E-03

1.41

2.54E-02

1.53

8.81E-03

TLDPHIEEQFGSGR

K7UR51

542341

Ribosomal protein s8e family protein

S(12): 100.0

34.6

0.89

5.47E-01

0.54

2.88E-04

0.94

5.93E-01

AAAVAALSSVLTAEQSGSSENLR

K7V5K5

100279855

Uncharacterized protein

S(19): 99.9

75.86

1.44

1.53E-01

1.64

5.41E-03

0.98

8.83E-01

STIGSESASVISSPK

K7W532

100384406

Geminivirus rep-interacting motor

S(9): 96.6; S(13): 96.7

26.81

1.6

1.29E-01

1.22

2.45E-04

1.68

5.35E-06

VAEGNDVSSTGITK

B4FZ13

100275558

Uncharacterized protein

S(8): 100.0; S(9): 100.0

30.11

0.82

6.92E-02

0.68

6.91E-02

0.95

8.38E-01

QEDESDEEDNR

K7TZN7

103653436

Rna-binding protein 25-like isoform

S(5): 100.0

39.93

1.2

1.09E-01

0.99

9.64E-01

1.08

4.05E-01

Transport

GYVVDPELGSNEG

B6SVU3

100281487

ABC transporter C05D10.3 in chromosome III

S(10): 100.0

46.31

0.58

1.02E-03

1.21

2.51E-01

1.04

6.95E-01

DEFSFGNR

K3YR20

101754121

Auxin efflux carrier

S(4): 100.0

31.03

0.77

9.87E-04

0.95

6.83E-01

0.68

1.33E-02

LMSIGSNEAAPTR

K7UJ01

100501607

Pdr-like abc transporter

S(3): 100.0; S(6): 100.0

49.94

0.64

1.52E-02

0.63

7.11E-03

0.83

1.02E-01

SLQSEDALVSQYFQESSSPK

K7VMZ7

100382746

Abc transporter b family member 6-like

S(18): 96.2

21.32

1.15

4.68E-01

1.45

2.91E-03

1.7

4.39E-03

TGFSSGPPPASPPAGGAPSYNSVAPPPDEIQLAK

B4F9M6

100191655

Far upstream element-binding protein

S(11): 99.8

38.37

0.52

4.07E-01

    

NAVEDDAESDDEEVPEGR

B4FQI5

100272547

Tpa: vgpw2523 isoform 1

S(9): 100.0

102.26

1.19

3.88E-01

0.61

6.48E-04

0.62

3.63E-03

EIRSPSPTPPPVVGPK

B4FWY2

100281081

Potassium transporter 10

S(4): 100.0; S(6): 100.0

41.67

1.39

1.53E-02

1.08

6.47E-01

1.84

1.68E-03

ADTTLGMSMR

B4FXV2

100281495

Citrate transporter family protein

S(1): 100.0

33.63

1.05

8.74E-01

1.18

3.35E-01

1.73

3.69E-03

ADTTLGMSMR

B4FXV2

100281495

Citrate transporter family protein

T(3): 100.0; S(8): 100.0

33.63

1.05

8.74E-01

1.18

3.35E-01

1.73

3.69E-03

AQELPLKTPENSPK

B4FYD7

100273971

Spore wall protein 2-like isoform

T(8): 100.0; S(12): 100.0

28.78

1.05

6.74E-01

0.68

1.01E-02

0.8

1.95E-02

EPSALSEPSSPK

B4FZY1

100274279

Sodium/hydrogen exchanger

S(3): 100.0; S(6): 100.0; S(10): 99.9

25.17

1.01

9.44E-01

1.51

6.63E-02

0.99

9.67E-01

EPSALSEPSSPK

B4FZY1

100274279

Sodium/hydrogen exchanger

S(3): 100.0; S(10): 99.9

25.17

1.01

9.44E-01

1.51

6.63E-02

0.99

9.67E-01

ATASGGGGGFSGGGGSNMLR

B6SNM4

100280873

Protein transport protein Sec61 beta subunit

S(16): 100.0

20.19

0.77

5.49E-01

0.64

6.95E-02

0.63

6.16E-02

GGGSPVAAVQDASDDGAR

B6U8S7

100285732

Carbohydrate transporter/ sugar porter/ transporter

S(4): 100.0

25.32

1.34

2.63E-02

0.66

2.14E-02

1.11

6.09E-01

FGLASPSSSDEEAK

B6U9U5

100276530

Protein gar2-like

S(9): 96.2

40.07

0.88

4.62E-01

0.67

2.55E-03

0.78

1.11E-02

DQEGGQPTGPEVVADDEVTSHRFTPAR

B8A307

100285151

Citrate transporter family protein

S(20): 92.4; T(24): 92.4

21.48

1.9

6.85E-02

1.68

1.99E-02

1.92

9.69E-03

SVPVGGAFSSK

C0PL03

100285177

Loc100285177 precursor

S(9): 98.8

51

 

4.66E-01

3.41

2.02E-03

  

RVDSLDVESMNVR

C5XBE9

8056191

Potassium transporter

S(4): 100.0

34.76

0.82

3.39E-01

0.69

1.84E-02

1.21

1.15E-01

NSTLPVSNNGSPITEGVSFDDER

E3UJZ2

100505456

Yellow stripe-like transporter

S(11): 100.0

84.2

1.16

4.80E-01

1.23

5.50E-02

0.2

2.11E-04

LGSSAFSLR

F0UXL1

100193700

Sugar transporter protein ERD6-S

S(3): 100.0; S(4): 100.0

38.67

0.95

7.46E-01

1.49

1.33E-04

1.65

7.57E-05

GGAGAGEESGSDHDGVLR

K7URW1

100282396

Solute carrier family facilitated glucose transporter member 8

S(9): 100.0; S(11): 100.0

34.45

1.18

1.52E-01

1.82

1.70E-03

1.62

4.23E-04

GELALVPQSPDR

B4FB91

542392

Ferritin

S(9): 100.0

58.84

0.73

3.12E-02

0.86

1.11E-01

0.39

1.18E-04

AAVEPDQSPITQPGAADASPSR

B4FF32

100193455

Uncharacterized protein

S(8): 100.0; S(19): 98.1

60.32

0.76

7.97E-02

0.65

1.19E-03

0.6

2.18E-03

  1. aSequence of the peptides identified by MS/MS.
  2. bProtein Group Accessions in Uniprot database.
  3. cProperly phosphoperpetides sites.
  4. dRatio of protein spot abundance in maize SA-treated samples to control samples, based on an average of three replicate gels from independent experiments. A ratio of 1.0 reflects a nonsignificant difference between controls and SA-treated samples (P< 0.05). Ratio changes in expression level of at least 1.5-fold.
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