Figure 1
From: Predicting the impact of promoter variability on regulatory outputs
The BqsR binding motif in the genome and its impact on global expression.
(A) The response regulator BqsR activates gene expression. The BqsR operator sequence contains a repeated pentamer (TTAAG) separated by 6 bp. (B) A comparison of the predicted operator strength with the observed experimental fold change in expression measured using RNA-seq. Operator strength was predicted with Equation 1 using best-fit values for parameters a and b. The curve shows y = x. For operator regions containing multiple BqsR binding sites, only the site with the highest score was plotted.
