Table 7 H3K4me3 association with promoters (+/−1000 bp from TSS) of misregulated genes.

From: DNMT3L enables accumulation and inheritance of epimutations in transgenic Drosophila

 

Total

Upregulated

Down regulated

No. of gene

No. of gene

No. of gene

No. of gene

No. of gene

No. of gene

promoters associated

promoters devoid

promoters associated

promoters devoid

promoters associated

promoters devoid

with H3K4me3

of H3K4me3

with H3K4me3

of H3K4me3

with H3K4me3

of H3K4me3

G1

26.09

73.91

17.48

82.52

34.62

65.38

G2

30.53

69.47

35.67

64.33

29.75

70.25

G4

40.09

59.91

45.75

54.25

35.34

64.66

G5

43.05

56.95

47.03

52.97

42.59

57.41

G5Phen

63.30

36.70

47.42

52.58

77.88

22.12

Total gene set

53.27

46.73

    
  1. Drosophila modENCODE data (Comprehensive encyclopedia of genomic functional elements in the model organisms C. elegans and D. melanogaster; http://www.modencode.org/; date of access, 15/9/15) for histone modifications (for 3rd instar larval stage) was extracted for the promoters of the misregulated genes and used for analysis.
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