Table 1 Genomic DNA analysis of integration sites in 13 selected PTS (phototaxis-screening) mutants.
Mutant | Location | Protein ID b | Function c | Methods for sequence determination |
---|---|---|---|---|
PTS1 | promoter (B) a | 516748 | Signal recognition particle receptor | TAIL-PCR & PCR-SP d |
PTS23 | promoter (B) | 525919 | Similar to homeobox A3 (Mus musculus) | Inverse PCR & PCR-SP |
PTS26 | 17th intron (B) | 516786 | Ionotropic glutamate receptor | TAIL-PCR & PCR-SP |
PTS36 | 5′-UTR (B) | 519251 | Putative glycine-rich cell wall structural protein | TAIL-PCR & PCR-SP |
PTS37 | 5′-UTR (B) | 519327 | Glycoside hydrolase | TAIL-PCR & PCR-SP |
PTS42 | promoter (B) | 516641 | Protein binding; PHD-type zinc finger | TAIL-PCR & PCR-SP |
PTS59 | 3rd intron (S) | 523869 | Diacylglycerol acyltransferase family | TAIL-PCR |
PTS61 | 3′-UTR (B) | 513005 | Vesicle-mediated transport; t-SNARE family | TAIL-PCR & PCR-SP |
PTS64 | 2nd intron (B) | 520695 | Biopterin transport-related protein BT1 | TAIL-PCR & PCR-SP |
PTS66 | 3′-UTR (B) | 518826 | Flagellar associated protein | TAIL-PCR & PCR-SP |
PTS69 | 5′-UTR (S) | 515661 | 3-phosphoshikimate 1-carboxyvinyltransferase | TAIL-PCR |
PTS118 | 5′-UTR (B) | 513996 | Nucleosome assembly; Histone H4 | TAIL-PCR & PCR-SP |
PTS124 | 6th exon (B) | 512634 | GDP mannose transporter | TAIL-PCR & PCR-SP |