Figure 1: Phylogenetic relationship and population structure of 35 Paenibacillus strains. | Scientific Reports

Figure 1: Phylogenetic relationship and population structure of 35 Paenibacillus strains.

From: Comparative genomic and functional analysis reveal conservation of plant growth promoting traits in Paenibacillus polymyxa and its closely related species

Figure 1

P. polymyxa strains are indicated by black circular beside the strain names. (A) ML phylogenetic tree was constructed using based on 244 single-copy core proteins shared by 35 genomes and an out-group (Bacillus cereus ATCC 10987). The phylogenetic tree was rooted by the out-group. Support values of phylogenetic tree are shown for nodes as maximum likelihood bootstrap. (B) ML phylogenetic tree of 14 strains within Poly-clade. The four subgroups are indicated by the vertical lines on the right of the phylogentic tree. (C) Analysis of population structure of 35 Paenibacillus strains and the B. cereus ATCC 10987 strain. The 36 strains were divided into 7 populations (K = 7) using STRUCTURE, which marked by brackets. Individuals are shown by thin vertical lines, which are divided into K colored segments standing for the estimated membership probabilities (Q) of each individual. Finally, all individuals are classified based on the Q-matrix. A column in a single color indicates clonal structure. A column in mixed colors indicates migrants and admixed individual.

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