Figure 3: Hierarchical clustering showing the correlations between genome-wide transcriptional patterns of strain SN2 in TF-N, TF-P, SW-N, and SW-P conditions.

The heat map was generated by Java TreeView (ver. 1.1.6r4) using mean-centered data of RPKM values. TF, tidal flat; SW, seawater; P, pyruvate; N, naphthalene.