Table 1 The nucleotide sequence identities between CBJ113 and HAdV-C representative strains.

From: Phylogenetic evidence for intratypic recombinant events in a novel human adenovirus C that causes severe acute respiratory infection in children

Region

% nucleotide identity

CBJ113 strain

HAdV-C1

HAdV-C2

HAdV-C5

HAdV-C6

HAdV-C57

E1B

98.91%

99.8%

98.5%

99.66%

99.12%

DNA polymerase

98.76%

99.55%

99.38%

99.86%

98.87%

penton base

99.77%

99.24%

98.35%

99.53%

99.77%

pVI

99.87%

97.56%

97.29%

96.73%

96.3%

hexon

85.27%

98.82%

81.76%

89.55%

88.14%

DBP

98.92%

97.43%

96.84%

97.3%

96.97%

100K

98.87%

99.38%

97.34%

99.33%

98.02%

fiber

66.55%

99.71%

66.48%

70.05%

69.47%

E4orf1

98.16%

98.16%

98.43%

97.9%

97.89%

Complete genome

95.52%

99.22%

94.7%

97.35%

96.8%

  1. The GenBank accession numbers of the representative strains are AC_000017 for HAdV-C1, AC_000007.1 for HAdV-C2, AC_000008 for HAdV-C5, HQ413315 for HAdV-C6 and HQ003817 for HAdV-C57. The highest similarity value in each row is in boldface.