Table 2 Molecular mapping of significant QTLs associated with grain weight in rice.
QTLs | LGs/chromosomes | Marker intervals with genetic positions (cM) | QTL physical intervals (bp) | Markers with genes tightly linked with QTLs | Protein-encoding genes | LOD | PVE (R2%) | A |
|---|---|---|---|---|---|---|---|---|
OsqGW2.1 | Os_Chr02 | OsILP02525 (62.3)–OsILP02535 (63.5) | OsILP02525 (8008952)–OsILP02535 (8115684) | OsILP02535 | Expressed protein | 12.9 | 19.5 | 3.8 |
OsqGW3.1 | Os_Chr03 | OsILP04627 (151.9)–OsILP04643 (153.6) | OsILP04627 (15986844)–OsILP04643 (16285445) | OsILP04643 | Protein kinase | 10.8 | 13.7 | 2.9 |
OsqGW5.1 | Os_Chr05 | OsILP07349 (37.9)–OsILP07365 (41.2) | OsILP07349 (4975648)–OsILP07365 (5602457) | OsILP07365 | Homeobox TF | 11.4 | 16.2 | 3.2 |
OsqGW6.1 | Os_Chr06 | OsILP08459 (1.76)–OsILP08488 (4.25) | OsILP08459 (239858)–OsILP08488 (579980) | OsILP08488 | Cytochrome P450 | 10.2 | 12.9 | 3.0 |
OsqGW6.2 | Os_Chr06 | OsILP09511 (188.2)–OsILP09514 (189.1) | OsILP09511 (24983167)–OsILP09514 (25535752) | OsILP09514 | bZIP TF | 9.8 | 11.9 | 3.5 |
OsqGW8.1 | Os_Chr08 | OsILP12265 (183.2)–OsILP12271 (183.7) | OsILP12265 (26498929)–OsILP12271 (26600724) | OsILP12265 | SBP TF | 13.7 | 21.6 | 4.3 |
