Table 3 The genotypes of rs2057178 in association with specific gene expressions.
From: A rare variant at 11p13 is associated with tuberculosis susceptibility in the Han Chinese population
ID | Adjusted P for moderate t test* | Adjusted P for usual t test* | Fold Change | Gene.title | Gene.symbol |
|---|---|---|---|---|---|
GI_31377766-S | 0.058 | 0.087571289 | 0.5 | polymerase (RNA) II (DNA directed) polypeptide M | POLR2M |
GI_33667071-S | 0.063 | 0.09215385 | 0.50698 | CD300a molecule | CD300A |
GI_12545379-S | 0.063 | 0.09215385 | 1.580083 | secretin | SCT |
GI_7705930-S | 0.09 | 0.098064729 | 0.378929 | HECT and RLD domain containing E3 ubiquitin protein ligase 5 | HERC5 |
GI_27312030-S | 0.09 | 0.098064729 | 1.164734 | tumor suppressor candidate 5 | TUSC5 |
GI_27545446-S | 0.09 | 0.112547153 | 0.547147 | vesicle-associated membrane protein 7 | VAMP7 |
GI_29789067-S | 0.127 | 0.156789692 | 1.42405 | family with sequence similarity 19 (chemokine (C-C motif)-like), member A5 | FAM19A5 |
GI_24497598-A | 0.131 | 0.162399477 | 0.673617 | phosphatidylinositol glycan anchor biosynthesis, class P | PIGP |
GI_42542393-S | 0.131 | 0.165706023 | 0.68302 | lysophosphatidylcholine acyltransferase 3 | LPCAT3 |
GI_18491001-S | 0.131 | 0.162399477 | 0.888843 | WNT1 inducible signaling pathway protein 2 | WISP2 |
GI_4885286-S | 0.131 | 0.165706023 | 0.702222 | guanine nucleotide binding protein (G protein), gamma 5 | GNG5 |
GI_24307950-S | 0.131 | 0.165706023 | 0.582367 | tudor domain containing 7 | TDRD7 |
GI_4758669-S | 0.131 | 0.165706023 | 0.594604 | leupaxin | LPXN |
GI_31652256-S | 0.131 | 0.165706023 | 1.310393 | v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B | MAFB |
GI_19924155-A | 0.14 | 0.173671278 | 0.752623 | regulatory factor X-associated ankyrin-containing protein | RFXANK |
GI_27734778-S | 0.149 | 0.191442937 | 0.823591 | DTW domain containing 2 | DTWD2 |
GI_21536304-S | 0.149 | 0.194057035 | 0.426317 | suppressor of cytokine signaling 2 | SOCS2 |
GI_40353206-S | 0.149 | 0.194057035 | 0.554785 | MRG/MORF4L binding protein | MRGBP |
GI_6912277-S | 0.149 | 0.194057035 | 0.641713 | COMM domain containing 3 | COMMD3 |
GI_4757769-S | 0.149 | 0.194057035 | 0.607097 | ras homolog family member H | RHOH |
GI_7019372-S | 0.149 | 0.200727205 | 0.528509 | fasciculation and elongation protein zeta 2 (zygin II) | FEZ2 |
GI_22212923-I | 0.177 | 0.220792973 | 0.773782 | nuclear transcription factor, X-box binding 1 | NFX1 |
GI_8922698-S | 0.177 | 0.220792973 | 0.574349 | CNDP dipeptidase 2 (metallopeptidase M20 family) | CNDP2 |
GI_37059763-S | 0.177 | 0.220792973 | 0.550953 | gephyrin | GPHN |
GI_38683857-I | 0.185 | 0.220792973 | 0.864537 | interferon regulatory factor 5 | IRF5 |
GI_34222319-S | 0.185 | 0.235007739 | 0.524858 | Josephin domain containing 1 | JOSD1 |
GI_42794768-S | 0.198 | 0.235007739 | 0.550953 | p21 protein (Cdc42/Rac)-activated kinase 1 | PAK1 |
GI_23397652-S | 0.199 | 0.235007739 | 0.668964 | phosphatidylinositol glycan anchor biosynthesis, class T | PIGT |
