Table 1 Summary of eight SNPs used in analysis.

From: SHEsisPlus, a toolset for genetic studies on polyploid species

SNP

Position a

Gene name and function

Allele b

Populations

Allele frequency*

Allele CEU CHB

rs12129861

1q21.1

PDZK1, 5′Intergenic

G/A

European

A 0.460 0.170

rs780094

2p23.3

GCKR, Intron16

G/A

European

A 0.394 0.566

rs734553

4p10.1

SLC2A9, Intron7

A/C

European

C 0.261 0.004

rs742132

6p22.2

LRRC16A, Intron34

T/C

European, Japanese

C 0.301 0.244

rs1183201

6p22.2

SLC17A1, Intron 3

T/A

European

A—

rs12356193

10q21.2

SLC16A9, Intron 5

A/G

European

G 0.186 0.141

rs17300741

11q13.1

SLC22A11, Intron4

A/G

European

G 0.531 0.073

rs505802

11q13.1

SLC22A12, 5′Intergenic

G/A

European

A 0.726 0.256

  1. aOn human genome build 18.
  2. bIn NCBI.
  3. *Collected from HapMap Data Phase III/Rel#3. CEU: Utah residents with Northern and Western European ancestry from the CEPH collection, CHB: Han Chinese in Beijing, China.