Table 1 Statistics of Illumina sequencing data.
Sample | Raw read length (bp) | Raw read numbers | Raw data bases (Gb) | Clean read numbers | Clean data bases (Gb) |
|---|---|---|---|---|---|
V2 | 100 | 51,627,124 | 5.163 | 41,800,428 | 4.180 |
V2_AL_06 | 100 | 45,431,094 | 4.543 | 41,802,402 | 4.180 |
V2_AL _24 | 100 | 47,412,962 | 4.741 | 37,235,258 | 3.724 |
V2_AL _72 | 100 | 36,315,648 | 3.632 | 33,489,918 | 3.349 |
V2_AA _06 | 100 | 16,681,012 | 1.668 | 11,887,184 | 1.189 |
V2_AA _24 | 100 | 63,463,382 | 6.346 | 50,457,162 | 5.046 |
V2_AA _72 | 100 | 71,339,808 | 7.134 | 59,922,442 | 5.992 |
NC89 | 100 | 32,050,662 | 3.205 | 29,124,816 | 2.912 |
NC89_AL_06 | 100 | 46,344,166 | 4.634 | 43,033,824 | 4.303 |
NC89_AL _24 | 100 | 14,971,724 | 1.497 | 12,220,324 | 1.222 |
NC89_AL _72 | 100 | 81,726,554 | 8.173 | 71,262,904 | 7.126 |
NC89_AA _06 | 100 | 125,912,182 | 12.591 | 113,830,604 | 11.383 |
NC89_AA _24 | 100 | 102,220,638 | 10.222 | 81,754,766 | 8.175 |
NC89_AA _72 | 100 | 222,544,794 | 22.254 | 180,174,190 | 18.017 |
Total | Â | 958,041,750 | 95.803 | 807,996,222 | 80.798 |
