Table 4 Classification of the novel proteins associated with cellulose and callose synthase complexes in cotton fibers.
Group | Protein name* | Total peptides (Exp 1) | Total peptides (Exp 2) | Total peptides (Exp 3) | Accession number | TM domain | Protein fuction | |||
|---|---|---|---|---|---|---|---|---|---|---|
Blank (B) | Treated (T) | Blank (B) | Treated (T) | Blank (B) | Treated (T) | |||||
CESA-associated | ||||||||||
I | Phenylcoumaran benzylic ether reductase-like protein | 3(2) @ | 8(5) | 2(1) | 3(2) | 3(3) | 6(5) | gi|124488476 | 0 | isoflavone reductase |
vacuolar H+ -ATPase catalytic subunit | 8(4) | 16(9) | 0(0) | 4(3) | 11(9) | 15(8) | gi|167313 | 0 | cytoskeleton, ATP binding, hydrolase activity | |
II | glyceraldehyde-3-phosphate dehydrogenase C subunit | 48(18) | 44(18) | 37(12) | 17(8) | 16(12) | 16(12) | gi|211906518 | 0 | NAD binding, NADP binding, oxidoreductase activity |
fasciclin-like arabinogalactan protein | 2(1) | 2(2) | 2(1) | 7(4) | 5(4) | 5(5) | gi|606942 | 1 | cell wall biogenesis, acetyl-CoA metabolic process | |
UDP-glucuronic acid decarboxylase 2 | 15(7) | 20(8) | 8(5) | 0(0) | 10(6) | 21(11) | gi|213950353 | 1 | UDP-xylose metabolic, UDP-glucuronate decarboxylase activity | |
tonoplast intrinsic protein | 0(0) | 1(1) | 2(1) | 2(1) | 1(1) | 1(1) | gi|227434194 | 6 | water channel, facilitate the transport of urea and hydrogen peroxide | |
CALS-associated | ||||||||||
I | ubiquitin extension protein | 8(5) | 12(5) | 5(3) | 7(3) | 9(4) | 10(4) | gi|73761683 | 0 | structural constituent of ribosome, ubiquitin-dependent protein catabolic process |
3-ketoacyl-CoA reductase 1 | 5(3) | 19(10) | 1(1) | 5(3) | 6(3) | 8(5) | gi|62956018 | 1 | acetoacetyl-CoA reductase, ketoreductase, oxidoreductase | |
II | plasma membrane H+ -ATPase, partial | 2(1) | 3(2) | 0(0) | 2(1) | 2(2) | 2(2) | gi|2911803 | 9 | ATPase activity, cation transport |
