Figure 4: Results of analyses using transposable element variants (TEVs).

(A) A circular plot for distribution of TEVs on the genome of GA. Four types of TE are represented by different colors (LTR : green, LINE : red, SINE: orange, and DNA: blue). (B) A clustering tree based on LTR presence patterns for 28 chicken genomes. Three groups for LH, GA, and KNC are well-defined. The neighbor-joining tree using whole genome variants and other TE types (LINE, SINE, and DNA) are shown in Figure S4.