Table 5 10 SNPs and gene expression in peripheral blood samples.
SNP | Chr | Allele | Effect Allele | P value | FDR | Gene | Cis-Trans |
|---|---|---|---|---|---|---|---|
rs1130214 | 14 | C/A | A | 1.92E-43 | 0 | AKT1 | cis |
rs1130214 | 14 | C/A | A | 5.99E-29 | 0 | AKT1 | cis |
rs2228001 | 3 | T/G | G | 1.32E-28 | 0 | XPC | cis |
rs2132572 | 7 | C/T | T | 5.18E-18 | 0 | IGFBP3 | cis |
rs159153 | 3 | T/C | C | 4.13E-12 | 0 | TTLL3 | cis |
rs2228000 | 3 | A/G | A | 6.36E-12 | 0 | XPC | cis |
rs1130214 | 14 | C/A | A | 1.19E-11 | 0 | SIVA1 | cis |
rs2228000 | 3 | A/G | A | 1.89E-10 | 0 | TMEM43 | cis |
rs2228001 | 3 | T/G | G | 1.89E-08 | 0 | TMEM43 | cis |
rs159153 | 3 | T/C | C | 1.91E-08 | 0 | CAMK1,OGG1 | cis |
rs25489 | 19 | C/T | T | 3.99E-07 | 1.09E-04 | PLAUR | cis |
rs11615 | 19 | A/G | G | 6.74E-07 | 2.14E-04 | ERCC1 | cis |
rs25489 | 19 | C/T | T | 1.07E-05 | 4.79E-03 | PHLDB3 | cis |
rs2132572 | 7 | C/T | T | 1.59E-05 | 7.39E-03 | IGFBP3 | cis |
rs159153 | 3 | T/C | C | 5.27E-05 | 2.23E-02 | BRPF1 | cis |
rs1042522 | 17 | C/G | G | 7.36E-05 | 2.97E-02 | CYB5D1 | cis |
rs344781 | 19 | T/C | C | 8.38E-05 | 3.32E-02 | PLAUR | cis |
rs344781 | 19 | T/C | C | 6.95E-04 | 1.89E-01 | PLAUR | cis |
rs1130214 | 14 | C/A | A | 8.03E-04 | 2.10E-01 | SIVA1 | cis |
rs11615 | 19 | A/G | G | 9.11E-04 | 2.28E-01 | KLC3 | cis |
rs159153 | 3 | T/C | C | 1.55E-03 | 3.22E-01 | CRELD1 | cis |
rs2299939 | 10 | C/A | A | 2.10E-03 | 3.84E-01 | PAPSS2 | cis |
