Figure 5: Non-metric multidimensional scaling (NMDS) plot of Bray-Curtis dissimilarity on abundance data transformed by a lg (x + 1) algorithm where x was designed as the number of normalized counts by DESeq2 package.
From: Fungal communities in sediments of subtropical Chinese seas as estimated by DNA metabarcoding

The BHS, NYS and SYS are represented with the black, red and green circles, respectively. Dotted ellipses indicate 95% confidence intervals around centroids of three sea regions.