Table 1 Percent nucleotide (nt) and amino acid (aa) sequence identities of pecan mosaic-associated virus to ten other potyviruses.
From: Discovery and small RNA profile of Pecan mosaic-associated virus, a novel potyvirus of pecan trees
Virus a | ScMV | LMV | PRV | PPV | PMV | TuMV | PVY-O | PVY-N | SPFMV | WYMV |
|---|---|---|---|---|---|---|---|---|---|---|
Genomic sequence (nt) | 55.8 | 58.9 | 52.6 | 54.6 | 53.0 | 55.4 | 25.1 | 51.8 | 54.0 | 24.0 |
Whole polyprotein (aa) | 50.4 | 53.6 | 46.2 | 52.0 | 47.0 | 50.7 | 47.5 | 47.3 | 49.9 | 19.7 |
CP (nt) | 59.0 | 57.4 | 59.0 | 56.0 | 59.4 | 61.2 | 27.1 | 60.7 | 55.6 | 37.8 |
CP (aa) | 66.2 | 69.5 | 63.8 | 63.4 | 66.7 | 69.0 | 65.7 | 66.2 | 60.1 | 9.9 |
