Table 1 Identification of 33 proteins affected by the lesR overexpression in Lysobacter enzymogenes.
From: A TonB-dependent receptor regulates antifungal HSAF biosynthesis in Lysobacter
Catalog no. | Spot no. | Fold change OH11(PBBR)/OH11(lesR) | Sequence coverage (%) | Gene accession no. | Gene name a /abbreviation | Functional catalog b | Function/Similarity | pl (cal) | Mr (cal) KD |
|---|---|---|---|---|---|---|---|---|---|
1 | 7-03 | +1000000 | 22 | KP293905 | TBDR9 | Inorganic ion transport and metabolis | TonB-dependent siderophore receptor | 5.26 | 83.5 |
2 | 7-05 | +3.71567 | 10 | KP293900 | TBDR4 | TonB-dependent receptor | 4.95 | 94.9 | |
3 | 7-12 | −2.42089 | 23 | KP293903 | TBDR7 | TonB-dependent outer membrane receptor | 4.86 | 103.9 | |
7-13 | −1000000 | 15 | |||||||
7-15 | −1000000 | 12 | |||||||
7-16 | −2.95065 | 9 | |||||||
7-18 | −1000000 | 19 | |||||||
7-30 | −1000000 | 13 | |||||||
4 | 7-19 | +2.36877 | 18 | KP293903 | TBDR8 | TonB-dependent receptor | 4.89 | 102.7 | |
7-28 | −6.99916 | 21 |  |  |  | ||||
5 | 7-20 | +6.49466 | 15 | KP293902 | TBDR6 | TonB-dependent receptor | 5.06 | 105.5 | |
7-21 | −6.21763 | 10 |  |  |  |  |  | ||
6 | 7-38 | +3.28287 | 9 | KP293901 | TBDR5 | TonB-dependent receptor | 5.24 | 102.3 | |
7 | 8-03 | −1000000 | 24 | KP293901 | TBDR3 | TonB-dependent receptor | 5.39 | 99.0 | |
8 | 8-06 | −2.06331 | 27 | KP293898 | TBDR2 | TonB-dependent receptor domain protein | 5.60 | 86.2 | |
9 | 7-49 | +1000000 | 6 | KP293897 | TBDR1 | putative tonb-dependent outer membrane receptor | 5.64 | 118.6 | |
10 | 7-07 | +1000000 | 28 | KP293926 | OH11GL004315/le4315 | Energy production and conversion | Dihydrolipoyl dehydrogenase | 6.03 | 50.4 |
11 | 8-22 | −2.28895 | 30 | KP293925 | OH11GL000895/le0895 | catalytic domain of components of various dehydrogenase complexes | 6.32 | 46.5 | |
12 | 7-14 | +3.75737 | 18 | KP293921 | OH11GL002176/le2176 | Lipid transport and metabolism | FadL family outer membrane protein | 5.27 | 48.4 |
7-42 | −1000000 | 26 | |||||||
13 | 7-25 | +1000000 | 22 | KP293928 | OmpA2 | Cell wall/membrane/envelope biogenesis | OmpA family outer membrane protein | 4.8 | 39.1 |
14 | 7-34 | +1000000 | 28 | KP293927 | OmpA1 | OmpA family outer membrane protein | 4.8 | 39.1 | |
15 | 7-26 | +2.82758 | 19 | KP293917 | OH11GL000050/le0050 | Posttranslational modification, protein turnover, chaperones | trigger factor | 4.96 | 48.8 |
7-45 | −1000000 | 16 | |||||||
7-51 | −8.98225 | 8 | |||||||
16 | 7-33 | +1000000 | 38 | KP293918 | OH11GL001285/le1285 | glutaredoxin-like protein | 4.98 | 32.7 | |
|  | 7-46 | −3.51678 | 44 |  |  |  |  |  | |
17 | 8-44 | −2.28179 | 13 | KP293918 | OH11GL002659/le2659 | chaperonin GroEL | 5.2 | 57.3 | |
18 | 7-22 | −1000000 | 22 | KP293907 | OH11GL001810/le1810 | Function unknown | DNA binding domain-containing protein | 4.85 | 38.1 |
19 | 7-23 | +1000000 | 53 | KP293910 | OH11GL002922/le2922 | hypothetical protein | 5.73 | 35.1 | |
20 | 7-28 | +6.99916 | 21 | KP293912 | OH11GL004158/le4158 | No hit | 5.22 | 86.7 | |
21 | 7-39 | −2.05056 | 58 | KP293908 | OH11GL002552/le2552 | hypothetical protein | 5.34 | 29.8 | |
22 | 7-43 | +1000000 | 17 | KP293913 | OH11GL004940/le4940 | No hit | 8.35 | 26.6 | |
23 | 7-44 | +1000000 | 24 | KP293906 | OH11GL002473/le2473 | No hit | 5.15 | 40.8 | |
24 | 8-30 | −2.4328 | 34 | gi|189474077 | hmgA | homogentisate 1, 2-dioxygenase | 5.93 | 50.1 | |
25 | 8-38 | +2.00608 | 40 | KP293909 | OH11GL002024/le2024 | putative secreted protein | 6.77 | 31.8 | |
26 | 8-41 | +2.54476 | 39 | KP293911 | OH11GL004856/le4856 | No hit | 5.2 | 26.6 | |
27 | 7-32 | +3.73628 | 17 | KP293915 | OH11GL003474/le3474 | General function prediction only | hypothetical protein | 4.69 | 24.4 |
28 | 7-35 | +1000000 | 29 | KP293916 | OH11GL004311/le4311 | hypothetical protein | 5.78 | 34.2 | |
29 | 8-35 | −2.79579 | 47 | KP293914 | OH11GL002539/le2539 | NADP-dependent alcohol dehydrogenase | 5.43 | 38.06 | |
30 | 7-36 | +2.63927 | 38 | KP293922 | OH11GL002141/le2141 | Amino acid transport and metabolism | spermidine synthase | 5.05 | 31.8 |
31 | 8-02 | +3.82444 | 18 | KP293920 | OH11GL000430/le0430 | Transcription | DNA-directed RNA polymerase subunit beta | 5.73 | 155.2 |
32 | 8-34 | −2.02788 | 33 | KP293920 | OH11GL003264/le3264 | Translation, ribosomal structure and biogenesis | glutamyl-tRNA synthetase | 5.56 | 51.6 |
33 | 8-47 | +1000000 | 18 | KP293924 | OH11GL005061/le5061 | No hit | 5.4 | 43.2 |
