Table 1 Experimental design and sequencing data.

From: Hyperlipidemia-associated gene variations and expression patterns revealed by whole-genome and transcriptome sequencing of rabbit models

Breed

DNA

RNA

Sample size

Depth of coverage per sample

Nucleotide diversity π

Watterson θ

Tajima D

Diet

Tissue collected

Sample size

Data (Gb) per tissue per sample

NZW

n = 10

13.34

2.80 × 10−3

2.26 × 10−3

0.77

Standard chow diet

Aorta, liver, heart, kidney

n = 4

5.10

0.3% cholesterol diet

Aorta, liver, heart, kidney

n = 4

5.13

JW

n = 10

12.94

1.61 × 10−3

1.37 × 10−3

−0.01

Standard chow diet

Aorta, liver, heart, kidney

n = 4

5.93

WHHL

n = 10

12.75

1.44 × 10−3

1.19 × 10−3

−0.08

Standard chow diet

Aorta, liver, heart, kidney

n = 4

5.70

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