Table 2 Novel contigs and MSTs from unmapped reads.
Sample & Enrichment | Novel Contigs | % Contigs with MSTs | % Contigs with GLS | % Contigs with both MST and GLS | Total MSTs | % Novel MSTs |
|---|---|---|---|---|---|---|
DLD1-Exome | 224 | 8 | 16 | 2 | 48 | 35 |
DLD1-GME | 1469 | 20 | 23 | 7 | 510 | 71 |
DLD1-Comb | 515 | 36 | 25 | 9 | 297 | 79 |
SW403-Exome | 162 | 19 | 16 | 3 | 55 | 62 |
SW403-GME | 372 | 46 | 34 | 19 | 227 | 92 |
SW403-Comb | 267 | 38 | 34 | 15 | 153 | 88 |
Normal-1-GME | 312 | 52 | 34 | 20 | 265 | 78 |
Normal-2-GME | 278 | 55 | 28 | 18 | 244 | 82 |
Normal-3-GME | 261 | 54 | 30 | 17 | 239 | 74 |
Normal-4-GME | 289 | 53 | 30 | 17 | 255 | 75 |
Normal-5-GME | 257 | 54 | 34 | 18 | 249 | 70 |
Normal-6-GME | 316 | 50 | 33 | 17 | 253 | 79 |
Normal-7-GME | 275 | 52 | 36 | 20 | 250 | 71 |
Normal-8-GME | 255 | 56 | 31 | 18 | 219 | 82 |
Normal-9-GME | 245 | 52 | 36 | 18 | 210 | 74 |
Normal-10-GME | 221 | 54 | 31 | 17 | 197 | 75 |
Normal-11-GME | 248 | 52 | 33 | 20 | 219 | 79 |
Normal-12-GME | 265 | 51 | 38 | 21 | 221 | 76 |
Normal-13-GME | 308 | 51 | 32 | 18 | 243 | 79 |
Normal-14-GME | 198 | 52 | 29 | 16 | 192 | 68 |
Normal-15-GME | 351 | 52 | 34 | 19 | 279 | 81 |
Normal-16-GME | 307 | 51 | 28 | 16 | 254 | 79 |
Total | 7395 | 42 | 29 | 14 | 5079 | 77 |
Concordant | 790 | 42 | 32 | 16 | 533 | 100 |
