Table 2 Parameters used in BE-META simulations in the DMPC membrane.

From: Fusing simulation and experiment: The effect of mutations on the structure and activity of the influenza fusion peptide

 

Radius of gyration

MSD

Hbonds

Hydrophobic contacts

Alphabeta

Alpharmsd

Antibetarmsd

Helix Contacts

Mindist

Sigma

0.002

0.002

0.5

10

0.05

0.2

0.2

0.15

0.025

Interval

0.65–0.75

0.02–0.1

38–50

420–530

18–21

0.2–13

0.2–6

1–5

0.1–0.5

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